RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 FAM182AQ5T1J6 154 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 MBLAC2Q68D91 279 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 PPP1R21Q6ZMI0 780 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 ARHGEF18Q6ZSZ5 1173 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 LRRC49Q8IUZ0 686 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 EXOC4Q96A65 974 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 ACDQ96AP0 544 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 TTC25Q96NG3 672 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 PDFQ9HBH1 243 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 IPO11Q9UI26 975 aaKnown RBP16.81■□□□□ 0.28
TPM1-219ENST00000559397 VPS51Q9UID3 782 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 TBC1D3BA6NDS4 549 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 GOLGA8MH3BSY2 632 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 J3KR12 359 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 MAN2B1O00754 1011 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 POLR3GO15318 223 aaPredicted RBP16.81■□□□□ 0.28
TPM1-219ENST00000559397 ACSL3O95573 720 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 MYZAPP0CAP1 466 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 CTSOP43234 321 aaPredicted RBP16.81■□□□□ 0.28
TPM1-219ENST00000559397 ZXDAP98168 799 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 IL10RBQ08334 325 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 IFFO1Q0D2I5 559 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 EIF4HQ15056 248 aaKnown RBP16.81■□□□□ 0.28
TPM1-219ENST00000559397 MSS51Q4VC12 460 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 FSTL4Q6MZW2 842 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 CROCCP2Q86T23 111 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 PDIK1LQ8N165 341 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 ZNF567Q8N184 647 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 ATPAF2Q8N5M1 289 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 FAM3CQ92520 227 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 C9orf72Q96LT7 481 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 C2orf49Q9BVC5 232 aaPredicted RBP16.81■□□□□ 0.28
TPM1-219ENST00000559397 LRRC4CQ9HCJ2 640 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 ELOVL2Q9NXB9 296 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 STARD13Q9Y3M8 1113 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 SHROOM3Q8TF72 1996 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 A0A0C4DFX4 3053 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 ANTXRLA6NF34 631 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 K7EQS6 105 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 CBX4O00257 560 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 PRAMEF11O60813 436 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 TCEA3O75764 348 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 CD160O95971 181 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 PEX11BO96011 259 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 EGFP01133 1207 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 POLR2EP19388 210 aaKnown RBP16.8■□□□□ 0.28
TPM1-219ENST00000559397 DRD1P21728 446 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 CD72P21854 359 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 PTPN3P26045 913 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 TNFRSF4P43489 277 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 STARD6P59095 220 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 PDIA2Q13087 525 aaKnown RBP16.8■□□□□ 0.28
TPM1-219ENST00000559397 FASTKD3Q14CZ7 662 aaKnown RBP16.8■□□□□ 0.28
TPM1-219ENST00000559397 PARP6Q2NL67 630 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 FAXCQ5TGI0 409 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 AGBL2Q5U5Z8 902 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 ZNF354CQ86Y25 554 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 CCDC13Q8IYE1 715 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 ZNF687Q8N1G0 1237 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 VAT1Q99536 393 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 ROPN1BQ9BZX4 212 aaPredicted RBP16.8■□□□□ 0.28
TPM1-219ENST00000559397 ROPN1Q9HAT0 212 aaPredicted RBP16.8■□□□□ 0.28
TPM1-219ENST00000559397 FBXL21Q9UKT6 434 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 HCN2Q9UL51 889 aa16.8■□□□□ 0.28
TPM1-219ENST00000559397 CXorf51AA0A1B0GTR3 108 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 GOLGA6L10A6NI86 522 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 KCNK1O00180 336 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 TIMM44O43615 452 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 CHRM1P11229 460 aaPredicted RBP16.79■□□□□ 0.28
TPM1-219ENST00000559397 CCNCP24863 283 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 CDK16Q00536 496 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 SULT2A1Q06520 285 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 PTPRNQ16849 979 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 KRT71Q3SY84 523 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 ZNF852Q6ZMS4 543 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 SORCS1Q8WY21 1168 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 FATE1Q969F0 183 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 MRGPRX3Q96LB0 322 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 ATP6V1G3Q96LB4 118 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 SERPINB12Q96P63 405 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 WDR83Q9BRX9 315 aaKnown RBP16.79■□□□□ 0.28
TPM1-219ENST00000559397 CIPCQ9C0C6 399 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 SP110Q9HB58 689 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 EIF2B3Q9NR50 452 aaKnown RBP16.79■□□□□ 0.28
TPM1-219ENST00000559397 VPS18Q9P253 973 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 TRHDEQ9UKU6 1024 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 ACTL7AQ9Y615 435 aa16.79■□□□□ 0.28
TPM1-219ENST00000559397 MYO18AQ92614 2054 aaKnown RBP16.79■□□□□ 0.28
TPM1-219ENST00000559397 MUC22E2RYF6 1773 aaPredicted RBP16.79■□□□□ 0.28
TPM1-219ENST00000559397 GOLGA6CA6NDK9 693 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 HMGB1P1B2RPK0 211 aaPredicted RBP16.78■□□□□ 0.28
TPM1-219ENST00000559397 MT-CO1P00395 513 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 ASLP04424 464 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 APRTP07741 180 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 DLDP09622 509 aaKnown RBP16.78■□□□□ 0.28
TPM1-219ENST00000559397 GOLGA6DP0CG33 693 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 TSHRP16473 764 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 MAGEA3P43357 314 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 VASPP50552 380 aaPredicted RBP16.78■□□□□ 0.28
TPM1-219ENST00000559397 ECT2LQ008S8 904 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms