RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PAK4O96013 591 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-208ENST00000558827 ITGAVP06756 1048 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 ZNF883P0CG24 379 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 GZMAP12544 262 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 ADRB3P13945 408 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 DESP17661 470 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 CASP14P31944 242 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 ABL2P42684 1182 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 NEK3P51956 506 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 CLDN6P56747 220 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 NXPH1P58417 271 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 RHOAP61586 193 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 SHC2P98077 582 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 FGL2Q14314 439 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 CYTH1Q15438 398 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 SMTNL2Q2TAL5 461 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 SETMARQ53H47 684 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-208ENST00000558827 SLC45A4Q5BKX6 768 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 ZNF542PQ5EBM4 170 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 ERMARDQ5T6L9 678 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 ARHGAP36Q6ZRI8 547 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 TRIM69Q86WT6 500 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 CPNE8Q86YQ8 564 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 HSPH1Q92598 858 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 SKA1Q96BD8 255 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 ARHGEF26Q96DR7 871 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 KLHDC7BQ96G42 594 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 CALN1Q9BXU9 219 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 HDAC8Q9BY41 377 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 SLC39A8Q9C0K1 460 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 THAP2Q9H0W7 228 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 PREBQ9HCU5 417 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 USP24Q9UPU5 2620 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 A0A087X0T9 212 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 IGLON5A6NGN9 336 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 PRAMEF26H0Y7S4 382 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 DFFAO00273 331 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 RAD51BO15315 384 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 FLRT2O43155 660 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 LRCH4O75427 683 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 PIGNO95427 931 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 GYPCP04921 128 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 PRKCGP05129 697 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 FAM228BP0C875 321 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 THEGLP0DJG4 465 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 ERCC2P18074 760 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 AMPD1P23109 780 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 ITGB7P26010 798 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 IL1R2P27930 398 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 SSR1P43307 286 aaKnown RBP12.71□□□□□ -0.37
SMAD3-208ENST00000558827 PAPOLAP51003 745 aaKnown RBP12.71□□□□□ -0.37
SMAD3-208ENST00000558827 SNRPD1P62314 119 aaKnown RBP12.71□□□□□ -0.37
SMAD3-208ENST00000558827 ZBED6P86452 979 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 SERINC3Q13530 473 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 CYP4V2Q6ZWL3 525 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-208ENST00000558827 MFSD2AQ8NA29 543 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 OR13H1Q8NG92 308 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 OR2AP1Q8NGE2 309 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 PPP1R16AQ96I34 528 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 ISCUQ9H1K1 167 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 CAPN11Q9UMQ6 739 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 LUC7L2Q9Y383 392 aaKnown RBP12.71□□□□□ -0.37
SMAD3-208ENST00000558827 PCDHGB2Q9Y5G2 931 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 FADS3Q9Y5Q0 445 aa12.71□□□□□ -0.37
SMAD3-208ENST00000558827 ARID1BQ8NFD5 2236 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-208ENST00000558827 TTC24A2A3L6 582 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 FAM149AA5PLN7 773 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 WASH4PA8MWX3 477 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 POP4O95707 220 aaKnown RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 IGSF6O95976 241 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 GSRP00390 522 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 SERPING1P05155 500 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 AKT2P31751 481 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 GJC1P36383 396 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 GRK6P43250 576 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 YBEYP58557 167 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 CCDC15Q0P6D6 951 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 DNAJC3Q13217 504 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 HNRNPDQ14103 355 aaKnown RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 ZNF805Q5CZA5 627 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 FIGNQ5HY92 759 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 CCDC122Q5T0U0 273 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 PPP1R2P3Q6NXS1 205 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 UNQ6494/PRO21346Q6UXR6 183 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 GDPD4Q6W3E5 623 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 DBX2Q6ZNG2 339 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 RAB44Q7Z6P3 723 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 TTC7BQ86TV6 843 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 UMODL1-AS1Q8N2C9 162 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 VOPP1Q96AW1 172 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 ISG20Q96AZ6 181 aaKnown RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 FEM1CQ96JP0 617 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 GDAP1L1Q96MZ0 367 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 NUP85Q9BW27 656 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 SLC17A9Q9BYT1 436 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 LRRC19Q9H756 370 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms