RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 KLF1Q13351 362 aaPredicted RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 ELAVL3Q14576 367 aaKnown RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 RFTN1Q14699 578 aaPredicted RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 NOMO1Q15155 1222 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 MARC1Q5VT66 337 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 TIGD7Q6NT04 549 aaPredicted RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 KIAA1324Q6UXG2 1013 aaKnown RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 DPY19L3Q6ZPD9 716 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 ZC3H18Q86VM9 953 aaKnown RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 RASSF3Q86WH2 238 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 CACUL1Q86Y37 369 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 SLC13A5Q86YT5 568 aaPredicted RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 CCDC13Q8IYE1 715 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 RYBPQ8N488 228 aaPredicted RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 TSEN2Q8NCE0 465 aaKnown RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 CHST14Q8NCH0 376 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 ACTL9Q8TC94 416 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 NSMCE1Q8WV22 266 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 OR8D1Q8WZ84 308 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 FATE1Q969F0 183 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 SIPA1Q96FS4 1042 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 MRGPRX1Q96LB2 322 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 CCDC114Q96M63 670 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 FAM118BQ9BPY3 351 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 CINPQ9BW66 212 aaPredicted RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 TPSD1Q9BZJ3 242 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 BRD8Q9H0E9 1235 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 RSPH9Q9H1X1 276 aaPredicted RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 FBRSQ9HAH7 460 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 HECAQ9UBI9 543 aaPredicted RBP10.55□□□□□ -0.72
PSMA4-207ENST00000558635 SEPT3Q9UH03 358 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 EBF1Q9UH73 591 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 ZKSCAN5Q9Y2L8 839 aa10.55□□□□□ -0.72
PSMA4-207ENST00000558635 ZNF318Q5VUA4 2279 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 H7C0C1 242 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 KCNK1O00180 336 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 MUSKO15146 869 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 AXIN1O15169 862 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 ALOX15BO15296 676 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 RNASEH1O60930 286 aaKnown RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 IGSF6O95976 241 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 JCHAINP01591 159 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 CCNB1P14635 433 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 CHRNA3P32297 505 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 MMP13P45452 471 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 RGRP47804 291 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 ATP5OP48047 213 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 PSMD8P48556 350 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 MMP16P51512 607 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 CCNHP51946 323 aaPredicted RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 NRLP54845 237 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 EIF3EP60228 445 aaKnown RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 SNRPD1P62314 119 aaKnown RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 ZNF33AQ06730 810 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 HNRNPDQ14103 355 aaKnown RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 ZNF235Q14590 738 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 PRKD1Q15139 912 aaPredicted RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 MYLK3Q32MK0 819 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 ZNF528Q3MIS6 628 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 FAM182AQ5T1J6 154 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 ZNF776Q68DI1 518 aaPredicted RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 ADAT2Q7Z6V5 191 aaKnown RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 WDR5BQ86VZ2 330 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 MMAAQ8IVH4 418 aaKnown RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 KMT2EQ8IZD2 1858 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 PGBD5Q8N414 524 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 TEX26Q8N6G2 289 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 PRSS33Q8NF86 280 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 OR2AP1Q8NGE2 309 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 OR6K2Q8NGY2 324 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 TFB1MQ8WVM0 346 aaKnown RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 MAML1Q92585 1016 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 PRCCQ92733 491 aaPredicted RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 ZNF419Q96HQ0 510 aaPredicted RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 PBKQ96KB5 322 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 EXOC2Q96KP1 924 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 GDAP1L1Q96MZ0 367 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 PSKH2Q96QS6 385 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 HEPHQ9BQS7 1158 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 C10orf88Q9H8K7 445 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 NT5MQ9NPB1 228 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 SEPT10Q9P0V9 454 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 NYNRINQ9P2P1 1898 aaKnown RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 EVLQ9UI08 416 aaPredicted RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 SARDHQ9UL12 918 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 PPM1HQ9ULR3 514 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 SNX12Q9UMY4 172 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 R3HDM2Q9Y2K5 976 aaKnown RBP10.54□□□□□ -0.72
PSMA4-207ENST00000558635 WASF2Q9Y6W5 498 aa10.54□□□□□ -0.72
PSMA4-207ENST00000558635 CCDC163A0A0D9SF12 145 aa10.53□□□□□ -0.72
PSMA4-207ENST00000558635 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
PSMA4-207ENST00000558635 HACD1B0YJ81 288 aa10.53□□□□□ -0.72
PSMA4-207ENST00000558635 H0Y858 1186 aa10.53□□□□□ -0.72
PSMA4-207ENST00000558635 RNF103O00237 685 aa10.53□□□□□ -0.72
PSMA4-207ENST00000558635 KRIT1O00522 736 aa10.53□□□□□ -0.72
PSMA4-207ENST00000558635 MID1O15344 667 aa10.53□□□□□ -0.72
PSMA4-207ENST00000558635 INSIG1O15503 277 aa10.53□□□□□ -0.72
PSMA4-207ENST00000558635 LEFTY1O75610 366 aa10.53□□□□□ -0.72
PSMA4-207ENST00000558635 NEBLO76041 1014 aa10.53□□□□□ -0.72
PSMA4-207ENST00000558635 POP4O95707 220 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms