RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.35□□□□□ -1.39
ZEB1-211ENST00000558440 MYCBPAPQ8TBZ2 947 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 IPO4Q8TEX9 1081 aaKnown RBP6.35□□□□□ -1.39
ZEB1-211ENST00000558440 SCFD1Q8WVM8 642 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 KBTBD7Q8WVZ9 684 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 FBXO32Q969P5 355 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 ERLEC1Q96DZ1 483 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 PCED1BQ96HM7 432 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 ZNF419Q96HQ0 510 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-211ENST00000558440 C8orf48Q96LL4 319 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 BBC3Q96PG8 261 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-211ENST00000558440 XPO6Q96QU8 1125 aaKnown RBP6.35□□□□□ -1.39
ZEB1-211ENST00000558440 MMS19Q96T76 1030 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 SSBP3Q9BWW4 388 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-211ENST00000558440 ELOVL4Q9GZR5 314 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 NACA2Q9H009 215 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 SNX25Q9H3E2 840 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 TMPRSS5Q9H3S3 457 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 PDE11AQ9HCR9 933 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 SPHK2Q9NRA0 654 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 DNAJC17Q9NVM6 304 aaKnown RBP6.35□□□□□ -1.39
ZEB1-211ENST00000558440 TBC1D7Q9P0N9 293 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 SEL1LQ9UBV2 794 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 SIX4Q9UIU6 781 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 MYRFQ9Y2G1 1151 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 MUC22E2RYF6 1773 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-211ENST00000558440 PIEZO2Q9H5I5 2752 aa6.35□□□□□ -1.39
ZEB1-211ENST00000558440 HECTD1Q9ULT8 2610 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 ATP8B3O60423 1300 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 NEDD8-MDP1E9PL57 170 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 COCHO43405 550 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 CBFA2T3O75081 653 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 PRPF6O94906 941 aaKnown RBP6.34□□□□□ -1.39
ZEB1-211ENST00000558440 GCNT3O95395 438 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 BMP15O95972 392 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 ZNF883P0CG24 379 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 IRF1P10914 325 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 YWHAQP27348 245 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 CD6P30203 668 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 GNL1P36915 607 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-211ENST00000558440 MATKP42679 507 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 STARD3Q14849 445 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 YOD1Q5VVQ6 348 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-211ENST00000558440 IL27RAQ6UWB1 636 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 LIMS2Q7Z4I7 341 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 TMEM25Q86YD3 366 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 BBS7Q8IWZ6 715 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 NUP93Q8N1F7 819 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 GPD1LQ8N335 351 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 GALNT15Q8N3T1 639 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 ZCCHC9Q8N567 271 aaKnown RBP6.34□□□□□ -1.39
ZEB1-211ENST00000558440 DTX3Q8N9I9 347 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 OR6B3Q8NGW1 331 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 OVCA2Q8WZ82 227 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 CDC6Q99741 560 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 TRIM55Q9BYV6 548 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 PCIF1Q9H4Z3 704 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 GAREM1Q9H706 876 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 DLL4Q9NR61 685 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 INTS13Q9NVM9 706 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 DKK4Q9UBT3 224 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 RAD54BQ9Y620 910 aa6.34□□□□□ -1.39
ZEB1-211ENST00000558440 PLXNA2O75051 1894 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 BLACEA4D250 179 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 ZNF233A6NK53 670 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 A8MXQ7 604 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 KIAA0391O15091 583 aaKnown RBP6.33□□□□□ -1.4
ZEB1-211ENST00000558440 TRIM24O15164 1050 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 FLRT2O43155 660 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 CLSTN1O94985 981 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 TYRP14679 529 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 IDEP14735 1019 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 PTPN1P18031 435 aaKnown RBP6.33□□□□□ -1.4
ZEB1-211ENST00000558440 ABCG1P45844 678 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 TUBP50607 506 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 CACNA2D1P54289 1103 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 TNNC1P63316 161 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 GRIN1Q05586 938 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 GOLGA8FQ08AF8 430 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 GOLGA8DPQ0D2H9 430 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 ALCAMQ13740 583 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 VASNQ6EMK4 673 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 TRMT10BQ6PF06 316 aaKnown RBP6.33□□□□□ -1.4
ZEB1-211ENST00000558440 ENGASEQ8NFI3 743 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 OR5B17Q8NGF7 314 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 DNASE2BQ8WZ79 361 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 MRGPRX1Q96LB2 322 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 ACOX2Q99424 681 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 GABRG3Q99928 467 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 MRPL45Q9BRJ2 306 aaKnown RBP6.33□□□□□ -1.4
ZEB1-211ENST00000558440 CBWD1Q9BRT8 395 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 MED10Q9BTT4 135 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 STRA6Q9BX79 667 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 GPR174Q9BXC1 333 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 BBS2Q9BXC9 721 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 ZNF518BQ9C0D4 1074 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 PRDM16Q9HAZ2 1276 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 CD93Q9NPY3 652 aa6.33□□□□□ -1.4
ZEB1-211ENST00000558440 TM7SF3Q9NS93 570 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms