RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 C4orf47A7E2U8 309 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 FAM157AC9JC47 383 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 KLK10O43240 276 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 TSPAN3O60637 253 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 ADAP00813 363 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 SERPINC1P01008 464 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 GNLYP22749 145 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 C21orf33P30042 268 aaPredicted RBP3.57□□□□□ -1.84
SPG11-206ENST00000558093 ARSFP54793 590 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 Q0VFX4 171 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 RPE65Q16518 533 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 IZUMO4Q1ZYL8 232 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 TDRD12Q587J7 1177 aaKnown RBP3.57□□□□□ -1.84
SPG11-206ENST00000558093 FBXO47Q5MNV8 452 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 NADSYN1Q6IA69 706 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 C8orf82Q6P1X6 216 aaPredicted RBP3.57□□□□□ -1.84
SPG11-206ENST00000558093 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.57□□□□□ -1.84
SPG11-206ENST00000558093 PATL1Q86TB9 770 aaKnown RBP3.57□□□□□ -1.84
SPG11-206ENST00000558093 CHD1LQ86WJ1 897 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 TMEM163Q8TC26 289 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 ADAMTS14Q8WXS8 1223 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 CNOT9Q92600 299 aaKnown RBP3.57□□□□□ -1.84
SPG11-206ENST00000558093 TXNDC15Q96J42 360 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 SCLT1Q96NL6 688 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 CD180Q99467 661 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 ISCA1Q9BUE6 129 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 CHMP4AQ9BY43 222 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 NPFFR1Q9GZQ6 430 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 CDT1Q9H211 546 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 SLCO5A1Q9H2Y9 848 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 HDAC6Q9UBN7 1215 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.57□□□□□ -1.84
SPG11-206ENST00000558093 PCDHGB3Q9Y5G1 929 aa3.57□□□□□ -1.84
SPG11-206ENST00000558093 VWA3AA6NCI4 1184 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 IFRD1O00458 451 aaPredicted RBP3.56□□□□□ -1.84
SPG11-206ENST00000558093 ACOT8O14734 319 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 DHX16O60231 1041 aaKnown RBP3.56□□□□□ -1.84
SPG11-206ENST00000558093 SERPINI2O75830 405 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 GLUD1P00367 558 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 CHRM4P08173 479 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 CNPP09543 421 aaKnown RBP3.56□□□□□ -1.84
SPG11-206ENST00000558093 TFPIP10646 304 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 FGF3P11487 239 aaPredicted RBP3.56□□□□□ -1.84
SPG11-206ENST00000558093 CTPS1P17812 591 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 AMTP48728 403 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 GLUD2P49448 558 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 TBL3Q12788 808 aaKnown RBP3.56□□□□□ -1.84
SPG11-206ENST00000558093 CAPSQ13938 189 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 RUNX2Q13950 521 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 NFATC4Q14934 902 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 NAA25Q14CX7 972 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 SHBQ15464 509 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 TAF12Q16514 161 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 SLC18A3Q16572 532 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 EDRF1Q3B7T1 1238 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 FBXO43Q4G163 708 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 CAPRIN2Q6IMN6 1127 aaKnown RBP3.56□□□□□ -1.84
SPG11-206ENST00000558093 TYW3Q6IPR3 259 aaKnown RBP3.56□□□□□ -1.84
SPG11-206ENST00000558093 IL20RBQ6UXL0 311 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 LDHAL6AQ6ZMR3 332 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 CREB3L2Q70SY1 520 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 LURAP1LQ8IV03 231 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 OR4N2Q8NGD1 307 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 GDPD5Q8WTR4 605 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 RNF183Q96D59 192 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 CTAGE1Q96RT6 745 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 KRTAP1-5Q9BYS1 174 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 C6orf106Q9H6K1 298 aaPredicted RBP3.56□□□□□ -1.84
SPG11-206ENST00000558093 CD93Q9NPY3 652 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 PAM16Q9Y3D7 125 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 RAI2Q9Y5P3 530 aa3.56□□□□□ -1.84
SPG11-206ENST00000558093 TYW5A2RUC4 315 aaKnown RBP3.55□□□□□ -1.84
SPG11-206ENST00000558093 LINC01553A4QN01 128 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 SH2D7A6NKC9 451 aaPredicted RBP3.55□□□□□ -1.84
SPG11-206ENST00000558093 CHL1O00533 1208 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 PER2O15055 1255 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 CEP104O60308 925 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 PIP5K1CO60331 668 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 KCNJ13O60928 360 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 ATP2C2O75185 946 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 FCGR1AP12314 374 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 DCTDP32321 178 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 RPL3P39023 403 aaKnown RBP3.55□□□□□ -1.84
SPG11-206ENST00000558093 HDAC4P56524 1084 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 DSCR9P59020 149 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 PPFIA1Q13136 1202 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 KEAP1Q14145 624 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 MYBPC2Q14324 1141 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 DCAF6Q58WW2 860 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 NAPEPLDQ6IQ20 393 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 FAM83HQ6ZRV2 1179 aaPredicted RBP3.55□□□□□ -1.84
SPG11-206ENST00000558093 ANKRD18AQ8IVF6 992 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 HERC6Q8IVU3 1022 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 DENND6AQ8IWF6 608 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 RBFAQ8N0V3 343 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 TEX45Q8NA69 505 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 NOC3LQ8WTT2 800 aaKnown RBP3.55□□□□□ -1.84
SPG11-206ENST00000558093 FAM216AQ8WUB2 273 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 TMED6Q8WW62 240 aa3.55□□□□□ -1.84
SPG11-206ENST00000558093 OTULINQ96BN8 352 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms