RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 GEMIN4P57678 1058 aaKnown RBP13.79□□□□□ -0.2
ALPK3-202ENST00000558077 KIF19Q2TAC6 998 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 MYLK3Q32MK0 819 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 PPM1JQ5JR12 505 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 TBC1D3GQ6DHY5 549 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 TBC1D3CQ6IPX1 549 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 ARHGAP36Q6ZRI8 547 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 ERN2Q76MJ5 926 aaKnown RBP13.79□□□□□ -0.2
ALPK3-202ENST00000558077 TRIM69Q86WT6 500 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 TBC1D3Q8IZP1 549 aaPredicted RBP13.79□□□□□ -0.2
ALPK3-202ENST00000558077 OR2AP1Q8NGE2 309 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 OR6K2Q8NGY2 324 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 CASKIN2Q8WXE0 1202 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 CCDC114Q96M63 670 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 SLC6A18Q96N87 628 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 CSPG4P5Q96PW8 444 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 UVRAGQ9P2Y5 699 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 HPCAL4Q9UM19 191 aa13.79□□□□□ -0.2
ALPK3-202ENST00000558077 FARP1Q9Y4F1 1045 aaPredicted RBP13.79□□□□□ -0.2
ALPK3-202ENST00000558077 ARID1BQ8NFD5 2236 aaPredicted RBP13.79□□□□□ -0.2
ALPK3-202ENST00000558077 ANKRD36A6QL64 1941 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 SHROOM3Q8TF72 1996 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 INSIG1O15503 277 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 SPINT1O43278 529 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 MTA2O94776 668 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 POP4O95707 220 aaKnown RBP13.78□□□□□ -0.2
ALPK3-202ENST00000558077 PEX11BO96011 259 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 CSRP1P21291 193 aaKnown RBP13.78□□□□□ -0.2
ALPK3-202ENST00000558077 ITGB7P26010 798 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 CTSKP43235 329 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 RECQLP46063 649 aaPredicted RBP13.78□□□□□ -0.2
ALPK3-202ENST00000558077 AFF3P51826 1226 aaKnown RBP13.78□□□□□ -0.2
ALPK3-202ENST00000558077 RACK1P63244 317 aaKnown RBP13.78□□□□□ -0.2
ALPK3-202ENST00000558077 MMRN1Q13201 1228 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 TCEAL1Q15170 157 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 HLA-BQ31612 363 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 CNGA4Q8IV77 575 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 HSPH1Q92598 858 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 MRFAP1L1Q96HT8 127 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 NSMCE3Q96MG7 304 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 ZDHHC5Q9C0B5 715 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 PREBQ9HCU5 417 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.78□□□□□ -0.2
ALPK3-202ENST00000558077 ZNHIT6Q9NWK9 470 aaKnown RBP13.78□□□□□ -0.2
ALPK3-202ENST00000558077 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 ZFR2Q9UPR6 939 aaKnown RBP13.78□□□□□ -0.2
ALPK3-202ENST00000558077 ANKRD6Q9Y2G4 727 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 SNX11Q9Y5W9 270 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 LRRK1Q38SD2 2015 aa13.78□□□□□ -0.2
ALPK3-202ENST00000558077 H3BRJ5 948 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 VILLO15195 856 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 DEKP35659 375 aaKnown RBP13.77□□□□□ -0.21
ALPK3-202ENST00000558077 ABL2P42684 1182 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 RGRP47804 291 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 SNRPD1P62314 119 aaKnown RBP13.77□□□□□ -0.21
ALPK3-202ENST00000558077 FGL2Q14314 439 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 ZNF284Q2VY69 593 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 NEK5Q6P3R8 708 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 DBX2Q6ZNG2 339 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 PARS2Q7L3T8 475 aaKnown RBP13.77□□□□□ -0.21
ALPK3-202ENST00000558077 SLC35G2Q8TBE7 412 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 CTNNBL1Q8WYA6 563 aaPredicted RBP13.77□□□□□ -0.21
ALPK3-202ENST00000558077 LRIG1Q96JA1 1093 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 CCDC42Q96M95 316 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 DEF6Q9H4E7 631 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 ZDHHC6Q9H6R6 413 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 DONSONQ9NYP3 566 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 UBA2Q9UBT2 640 aaPredicted RBP13.77□□□□□ -0.21
ALPK3-202ENST00000558077 FNDC3AQ9Y2H6 1198 aaKnown RBP13.77□□□□□ -0.21
ALPK3-202ENST00000558077 FADS3Q9Y5Q0 445 aa13.77□□□□□ -0.21
ALPK3-202ENST00000558077 ACACBO00763 2458 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 A0A1W2PQU0 124 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 ARHGAP42A6NI28 874 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 KRIT1O00522 736 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 KCNK3O14649 394 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 MUSKO15146 869 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 DAPK3O43293 454 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 AP1G1O43747 822 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 BUB1BO60566 1050 aaPredicted RBP13.76□□□□□ -0.21
ALPK3-202ENST00000558077 OPHN1O60890 802 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 RNGTTO60942 597 aaKnown RBP13.76□□□□□ -0.21
ALPK3-202ENST00000558077 LCA5LO95447 670 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 TPM1P09493 284 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 ZNF883P0CG24 379 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 ADRB3P13945 408 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 FECHP22830 423 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 MAT2AP31153 395 aaKnown RBP13.76□□□□□ -0.21
ALPK3-202ENST00000558077 DPYSL3Q14195 570 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 ZNF423Q2M1K9 1284 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 TSR1Q2NL82 804 aaKnown RBP13.76□□□□□ -0.21
ALPK3-202ENST00000558077 TMEM259Q4ZIN3 620 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 ZNF805Q5CZA5 627 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 N4BP2L1Q5TBK1 243 aaPredicted RBP13.76□□□□□ -0.21
ALPK3-202ENST00000558077 SEL1L3Q68CR1 1132 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 NAPEPLDQ6IQ20 393 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 HORMAD1Q86X24 394 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 ZNF354CQ86Y25 554 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 LZTR1Q8N653 840 aa13.76□□□□□ -0.21
ALPK3-202ENST00000558077 TMEM145Q8NBT3 493 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms