RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 USP30Q70CQ3 517 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 FAM124AQ86V42 546 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 AADATQ8N5Z0 425 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 FATE1Q969F0 183 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 OMDQ99983 421 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 BRD8Q9H0E9 1235 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 EVLQ9UI08 416 aaPredicted RBP25.92■■□□□ 1.74
SMAD6-202ENST00000557916 FANCMQ8IYD8 2048 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 A0A1W2PP55 124 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 GOLGA6L9A6NEM1 432 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 APOC4-APOC2K7ER74 178 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 MUSKO15146 869 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 RNASEH2AO75792 299 aaKnown RBP25.91■■□□□ 1.74
SMAD6-202ENST00000557916 TJP3O95049 919 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 APOC2P02655 101 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 BCKDHBP21953 392 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 CD6P30203 668 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 RGRP47804 291 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 NSUN2Q08J23 767 aaKnown RBP eCLIP25.91■■□□□ 1.74
SMAD6-202ENST00000557916 AP1B1Q10567 949 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 KBTBD6Q86V97 674 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 HDDC3Q8N4P3 179 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 TEX26Q8N6G2 289 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 MAML1Q92585 1016 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 TOE1Q96GM8 510 aaKnown RBP25.91■■□□□ 1.74
SMAD6-202ENST00000557916 LRIG1Q96JA1 1093 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 TLR10Q9BXR5 811 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 EPC1Q9H2F5 836 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 WSB2Q9NYS7 404 aaPredicted RBP25.91■■□□□ 1.74
SMAD6-202ENST00000557916 SERGEFQ9UGK8 458 aa25.91■■□□□ 1.74
SMAD6-202ENST00000557916 RNF103O00237 685 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 KIF5CO60282 957 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 CCNB1P14635 433 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 HSPA9P38646 679 aaKnown RBP25.9■■□□□ 1.74
SMAD6-202ENST00000557916 CSNK1DP48730 415 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 ZNF33AQ06730 810 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 ZNF569Q5MCW4 686 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 SEL1L2Q5TEA6 688 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 SLC36A4Q6YBV0 504 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 SRLQ86TD4 932 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 SEMA4AQ9H3S1 761 aa25.9■■□□□ 1.74
SMAD6-202ENST00000557916 KCNK3O14649 394 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 INSIG1O15503 277 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 B4GALNT4Q76KP1 1039 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 PGBD5Q8N414 524 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 VOPP1Q96AW1 172 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 PPP1R16AQ96I34 528 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 CARD9Q9H257 536 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 NEUROG2Q9H2A3 272 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 NT5MQ9NPB1 228 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 DYRK4Q9NR20 520 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 FZD4Q9ULV1 537 aa25.89■■□□□ 1.74
SMAD6-202ENST00000557916 KCNK1O00180 336 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 PLK4O00444 970 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 NDUFS2O75306 463 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 NEBLO76041 1014 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 DRD3P35462 400 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 SCNN1BP51168 640 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 RPL6Q02878 288 aaKnown RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 CNTN1Q12860 1018 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 PLK5Q496M5 336 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 ZC3H18Q86VM9 953 aaKnown RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 SLC35F6Q8N357 371 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 TFB1MQ8WVM0 346 aaKnown RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 ARRDC3Q96B67 414 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 ZNF419Q96HQ0 510 aaPredicted RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 OSBPL1AQ9BXW6 950 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 CPEB1Q9BZB8 566 aaKnown RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 BTBD1Q9H0C5 482 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 RBM22Q9NW64 420 aaKnown RBP eCLIP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 JRKLQ9Y4A0 524 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 SHROOM3Q8TF72 1996 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 UGT2B4P06133 528 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 MSNP26038 577 aaKnown RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 ACSL1P33121 698 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 OTUD4Q01804 1114 aaKnown RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 GRM3Q14832 879 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 NOMO1Q15155 1222 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 GDPD4Q6W3E5 623 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 ACTL9Q8TC94 416 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 ZC3H10Q96K80 434 aaKnown RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 MGME1Q9BQP7 344 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 DUSP15Q9H1R2 295 aaPredicted RBP25.88■■□□□ 1.73
SMAD6-202ENST00000557916 SGK2Q9HBY8 427 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 SEPT10Q9P0V9 454 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 RAB23Q9ULC3 237 aa25.88■■□□□ 1.73
SMAD6-202ENST00000557916 ENC1O14682 589 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 JCHAINP01591 159 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 ITGB7P26010 798 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 MAXP61244 160 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 IFI35P80217 286 aaPredicted RBP25.87■■□□□ 1.73
SMAD6-202ENST00000557916 ITKQ08881 620 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 PRKD1Q15139 912 aaPredicted RBP25.87■■□□□ 1.73
SMAD6-202ENST00000557916 ELF2Q15723 593 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 LPAL2Q16609 132 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 ZNF805Q5CZA5 627 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 LPCAT2Q7L5N7 544 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 KLHL32Q96NJ5 620 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 GPR174Q9BXC1 333 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms