RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CLEC4CQ8WTT0 213 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 THAP3Q8WTV1 239 aaPredicted RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 KCTD13Q8WZ19 329 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 AZIN2Q96A70 460 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 EEF2KMTQ96G04 330 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 FAXDC2Q96IV6 333 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 EAF1Q96JC9 268 aaPredicted RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 FCRL2Q96LA5 508 aaPredicted RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 SPAG5Q96R06 1193 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 MYOCQ99972 504 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 C2orf49Q9BVC5 232 aaPredicted RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 SRRTQ9BXP5 876 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 DPH1Q9BZG8 443 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 UPF2Q9HAU5 1272 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 CNGB3Q9NQW8 809 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 THSD1Q9NS62 852 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 RAB20Q9NX57 234 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 FAM13BQ9NYF5 915 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 HESX1Q9UBX0 185 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 XPO7Q9UIA9 1087 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 SARDHQ9UL12 918 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 PCDHA7Q9UN72 937 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 MAPK8IP1Q9UQF2 711 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 DMTF1Q9Y222 760 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 TEX15Q9BXT5 2789 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 NYNRINQ9P2P1 1898 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 PMS2P1A4D2B8 440 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 PRAMEF26H0Y7S4 382 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 K7ENP7 123 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SLC31A1O15431 190 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SLC7A4O43246 635 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 PIAS2O75928 621 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SCGB1D2O95969 90 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 MOCS2O96007 188 aaPredicted RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 FYNP06241 537 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 GP1BAP07359 652 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 PDGFRAP16234 1089 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 PRLRP16471 622 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 NUDT1P36639 197 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 EIF4A3P38919 411 aaKnown RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 EPHA4P54764 986 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 TAS2R38P59533 333 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 ADAM9Q13443 819 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 CUL2Q13617 745 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 ISXQ2M1V0 245 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 CBWD6Q4V339 395 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 ZCWPW2Q504Y3 356 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SETMARQ53H47 684 aaPredicted RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 HS1BP3Q53T59 392 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 C3orf38Q5JPI3 329 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 CT47A1Q5JQC4 288 aaPredicted RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 CBWD3Q5JTY5 395 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 TBCELQ5QJ74 424 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 CBWD5Q5RIA9 395 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 INO80CQ6PI98 192 aaPredicted RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 C14orf80Q86SX3 495 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 CIR1Q86X95 450 aaPredicted RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 LGI2Q8N0V4 545 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SLC22A18ASQ8N1D0 253 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 CELF2-AS1Q8N7Q2 184 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 BEND7Q8N7W2 519 aaPredicted RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 UBR7Q8N806 425 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 OR13H1Q8NG92 308 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 EPS8L3Q8TE67 593 aaKnown RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 ZDHHC1Q8WTX9 485 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 FRS2Q8WU20 508 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 IRGQQ8WZA9 623 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 TFAP2BQ92481 460 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 KLHDC7BQ96G42 594 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 INTS4Q96HW7 963 aaKnown RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 APOLD1Q96LR9 279 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SLC46A1Q96NT5 459 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SERPINB11Q96P15 392 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 DDX50Q9BQ39 737 aaKnown RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 ZSWIM1Q9BR11 485 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 TRIM4Q9C037 500 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 ABCG4Q9H172 646 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 FZD3Q9NPG1 666 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 KLHL11Q9NVR0 708 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 NLGN3Q9NZ94 848 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SCHIP1Q9P0W5 487 aaPredicted RBP6.01□□□□□ -1.45
VPS33B-207ENST00000557470 PPM1HQ9ULR3 514 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SATB2Q9UPW6 733 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 TLR6Q9Y2C9 796 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 PCDHGC4Q9Y5F7 938 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 SCINQ9Y6U3 715 aa6.01□□□□□ -1.45
VPS33B-207ENST00000557470 LRRK2Q5S007 2527 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 DOCK9Q9BZ29 2069 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 K7ESM1 405 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 M0QYV0 167 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 RNGTTO60942 597 aaKnown RBP6□□□□□ -1.45
VPS33B-207ENST00000557470 NEBLO76041 1014 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 RHOBTB3O94955 611 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 RASGRP1O95267 797 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 CALCAP01258 141 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 ALPPL2P10696 532 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 VDRP11473 427 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 TACR2P21452 398 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 TGM2P21980 687 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 RPL13P26373 211 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms