RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SBK1Q52WX2 424 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 EARS2Q5JPH6 523 aaKnown RBP4.99□□□□□ -1.61
ATXN3-246ENST00000557030 HAUS3Q68CZ6 603 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 ANKRD16Q6P6B7 361 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 C11orf96Q7Z7L8 435 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 LRRC45Q96CN5 670 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 NMD3Q96D46 503 aaKnown RBP4.99□□□□□ -1.61
ATXN3-246ENST00000557030 CALML4Q96GE6 196 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 TSG101Q99816 390 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 CRNKL1Q9BZJ0 848 aaKnown RBP4.99□□□□□ -1.61
ATXN3-246ENST00000557030 GBA2Q9HCG7 927 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-246ENST00000557030 RIC8AQ9NPQ8 531 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 GDF3Q9NR23 364 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 ATP8A2Q9NTI2 1148 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 DLL3Q9NYJ7 618 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 LRWD1Q9UFC0 647 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 KIAA1551Q9HCM1 1747 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 SBF2Q86WG5 1849 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 GOLGB1Q14789 3259 aaKnown RBP4.99□□□□□ -1.61
ATXN3-246ENST00000557030 MAST2Q6P0Q8 1798 aa4.99□□□□□ -1.61
ATXN3-246ENST00000557030 ATP8B3O60423 1300 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 BAZ2AQ9UIF9 1905 aaKnown RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 TRIM49BA6NDI0 452 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 BTNL10A8MVZ5 291 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 TARM1B6A8C7 271 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 H0YIZ8 118 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 RAB27BO00194 218 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 QSOX1O00391 747 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 ADAMTS3O15072 1205 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 RGS10O43665 173 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 TJP3O95049 919 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 RASAL1O95294 804 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 MOCS3O95396 460 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 GNA14O95837 355 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 PRKCGP05129 697 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 OR52Z1P0C646 297 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 VEGFAP15692 232 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 ANXA13P27216 316 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 ALDH5A1P51649 535 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 ATXN1P54253 815 aaKnown RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 NAP1L1P55209 391 aaKnown RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 ASIC1P78348 528 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 IFFO1Q0D2I5 559 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 BIRC3Q13489 604 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 GRAPQ13588 217 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 CUL1Q13616 776 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 IL17AQ16552 155 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 PTGISQ16647 500 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 SLC9C1Q4G0N8 1177 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 C10orf76Q5T2E6 689 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 NAA35Q5VZE5 725 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 CENPPQ6IPU0 288 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 PDXDC1Q6P996 788 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 DPY19L3Q6ZPD9 716 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 CCDC121Q6ZUS5 278 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 C15orf52Q6ZUT6 534 aaKnown RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 CACNA2D4Q7Z3S7 1137 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 C1QL2Q7Z5L3 287 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 WDR53Q7Z5U6 358 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 IQCKQ8N0W5 287 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 SPARTQ8N0X7 666 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 ABRAQ8N0Z2 381 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 KRT78Q8N1N4 520 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 GUF1Q8N442 669 aaKnown RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 SRBD1Q8N5C6 995 aaKnown RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 SEMA6DQ8NFY4 1073 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 DNAJB14Q8TBM8 379 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 GRAPLQ8TC17 118 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-246ENST00000557030 TAF4BQ92750 862 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 ATP6V1G3Q96LB4 118 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 ZIM3Q96PE6 472 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 LRRC1Q9BTT6 524 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 TRIM9Q9C026 710 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 NDST4Q9H3R1 872 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 PLCB1Q9NQ66 1216 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 AGPAT5Q9NUQ2 364 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 MID2Q9UJV3 735 aa4.98□□□□□ -1.61
ATXN3-246ENST00000557030 MYH2Q9UKX2 1941 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 LAMB1P07942 1786 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 hCG_1642624A0A1W2PR95 340 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 MANSC4A6NHS7 340 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-246ENST00000557030 TSPY2A6NKD2 308 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 LINC01548A6NM66 108 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 F8W8V4 182 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 NMT2O60551 498 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 HEXIM1O94992 359 aaKnown RBP4.97□□□□□ -1.61
ATXN3-246ENST00000557030 ONECUT2O95948 504 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 FAM107AO95990 144 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 LDHAP00338 332 aaKnown RBP4.97□□□□□ -1.61
ATXN3-246ENST00000557030 SERPING1P05155 500 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 HNRNPCP07910 306 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATXN3-246ENST00000557030 CELA2AP08217 269 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 FAM163BP0C2L3 166 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 CCDC172P0C7W6 258 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 MYZAPP0CAP1 466 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 IL1R1P14778 569 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 PAX3P23760 479 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 SERPINB3P29508 390 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 GNA11P29992 359 aa4.97□□□□□ -1.61
ATXN3-246ENST00000557030 HSPA9P38646 679 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms