RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TAF6P49848 677 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 RAB27AP51159 221 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 PRMT2P55345 433 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 GSCP56915 257 aaPredicted RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 RPL7AP62424 266 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 MRPS25P82663 173 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 CAV1Q03135 178 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 GABPB1Q06547 395 aaPredicted RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 HLTFQ14527 1009 aaKnown RBP eCLIP4.64□□□□□ -1.67
SRP54-212ENST00000556992 ELAVL1Q15717 326 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 PTGISQ16647 500 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 SOWAHAQ2M3V2 549 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 TUBB8Q3ZCM7 444 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 BOLA3Q53S33 107 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 SPDYCQ5MJ68 293 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 DCAF12L1Q5VU92 463 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 MBNL2Q5VZF2 373 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 ARHGAP17Q68EM7 881 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 DUPD1Q68J44 220 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 CCSAPQ6IQ19 270 aaPredicted RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 CCDC137Q6PK04 289 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 MAMDC2Q7Z304 686 aaPredicted RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 TMEM110Q86TL2 294 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 CCDC50Q8IVM0 306 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 MAP7D3Q8IWC1 876 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 SCUBE1Q8IWY4 988 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 CCDC105Q8IYK2 499 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 IQCKQ8N0W5 287 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 ANKRD53Q8N9V6 530 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 ANKRD52Q8NB46 1076 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 BBOF1Q8ND07 529 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 C1orf131Q8NDD1 294 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 OR6B3Q8NGW1 331 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 UBA3Q8TBC4 463 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 FAM71BQ8TC56 605 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 RAET1EQ8TD07 263 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 CCHCR1Q8TD31 782 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 CASKIN2Q8WXE0 1202 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 SLCO2A1Q92959 643 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 C18orf25Q96B23 403 aaPredicted RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 MCRS1Q96EZ8 462 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 EXOC2Q96KP1 924 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 CAPNS2Q96L46 248 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 ZNF560Q96MR9 790 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 ZMAT2Q96NC0 199 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 CNPY3Q9BT09 278 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 MLST8Q9BVC4 326 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 APOL6Q9BWW8 343 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 GPR87Q9BY21 358 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 OSBPL8Q9BZF1 889 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 ARHGAP39Q9C0H5 1083 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 SENP6Q9GZR1 1112 aaPredicted RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 DDX47Q9H0S4 455 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 NXF3Q9H4D5 531 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 RNF186Q9NXI6 227 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 DDX20Q9UHI6 824 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 HPCAL4Q9UM19 191 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 DRG1Q9Y295 367 aaKnown RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 HES2Q9Y543 173 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 IPPQ9Y573 584 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 CDY2AQ9Y6F7 541 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 RLFQ13129 1914 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 SCN4AP35499 1836 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 A0A0U1RQF3 1178 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 FAM170AA1A519 330 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 ARHGEF37A1IGU5 675 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 C2orf78A6NCI8 922 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 MYADML2A6NDP7 307 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 GOLGA6L10A6NI86 522 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 GOLGA8KD6RF30 607 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 GOLGA8SH3BPF8 625 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 M0QYV0 167 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 CYB561D2O14569 222 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 POLR3GO15318 223 aaPredicted RBP4.63□□□□□ -1.67
SRP54-212ENST00000556992 RASGRP1O95267 797 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 NUDT3O95989 172 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 THP07101 528 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 PDGFRBP09619 1106 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 MYBL2P10244 700 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 RALAP11233 206 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 PDGFRAP16234 1089 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 WARSP23381 471 aaKnown RBP4.63□□□□□ -1.67
SRP54-212ENST00000556992 PSMA2P25787 234 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 CCND3P30281 292 aaPredicted RBP4.63□□□□□ -1.67
SRP54-212ENST00000556992 PTPN7P35236 360 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 RDXP35241 583 aaKnown RBP4.63□□□□□ -1.67
SRP54-212ENST00000556992 HSPA9P38646 679 aaKnown RBP4.63□□□□□ -1.67
SRP54-212ENST00000556992 LHX1P48742 406 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 MARCKSL1P49006 195 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 MAN2A2P49641 1150 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 GUCY2FP51841 1108 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 ACLYP53396 1101 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 TAS2R40P59535 323 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 LILRA4P59901 499 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 SLC6A3Q01959 620 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 CALCOCO2Q13137 446 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 PDCLQ13371 301 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 ITGA7Q13683 1181 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 SLMAPQ14BN4 828 aa4.63□□□□□ -1.67
SRP54-212ENST00000556992 PPP1R7Q15435 360 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms