RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 ZNF212Q9UDV6 495 aa15.05■□□□□ -0
CHD8-211ENST00000556833 DNAI1Q9UI46 699 aa15.05■□□□□ -0
CHD8-211ENST00000556833 SATB2Q9UPW6 733 aa15.05■□□□□ -0
CHD8-211ENST00000556833 CHD5Q8TDI0 1954 aa15.04■□□□□ -0
CHD8-211ENST00000556833 IGLV3-10A0A075B6K4 115 aa15.04■□□□□ -0
CHD8-211ENST00000556833 ILVBLA1L0T0 632 aa15.04■□□□□ -0
CHD8-211ENST00000556833 GTPBP10A4D1E9 387 aaKnown RBP15.04■□□□□ -0
CHD8-211ENST00000556833 AGRPO00253 132 aa15.04■□□□□ -0
CHD8-211ENST00000556833 KRIT1O00522 736 aa15.04■□□□□ -0
CHD8-211ENST00000556833 MUSKO15146 869 aa15.04■□□□□ -0
CHD8-211ENST00000556833 KLK10O43240 276 aa15.04■□□□□ -0
CHD8-211ENST00000556833 F9P00740 461 aa15.04■□□□□ -0
CHD8-211ENST00000556833 UGT2B4P06133 528 aa15.04■□□□□ -0
CHD8-211ENST00000556833 JUNDP17535 347 aa15.04■□□□□ -0
CHD8-211ENST00000556833 L1CAMP32004 1257 aa15.04■□□□□ -0
CHD8-211ENST00000556833 HNRNPKP61978 463 aaKnown RBP eCLIP15.04■□□□□ -04e-6■■■■□ 20.5
CHD8-211ENST00000556833 SGCGQ13326 291 aa15.04■□□□□ -0
CHD8-211ENST00000556833 MIIPQ5JXC2 388 aa15.04■□□□□ -0
CHD8-211ENST00000556833 ATXN7L2Q5T6C5 722 aaPredicted RBP15.04■□□□□ -0
CHD8-211ENST00000556833 KIAA1161Q6NSJ0 714 aa15.04■□□□□ -0
CHD8-211ENST00000556833 RETSATQ6NUM9 610 aa15.04■□□□□ -0
CHD8-211ENST00000556833 VPS36Q86VN1 386 aa15.04■□□□□ -0
CHD8-211ENST00000556833 PARGQ86W56 976 aa15.04■□□□□ -0
CHD8-211ENST00000556833 ZNF354CQ86Y25 554 aa15.04■□□□□ -0
CHD8-211ENST00000556833 ZDHHC17Q8IUH5 632 aa15.04■□□□□ -0
CHD8-211ENST00000556833 ZNF843Q8N446 348 aa15.04■□□□□ -0
CHD8-211ENST00000556833 PCDH20Q8N6Y1 951 aaKnown RBP15.04■□□□□ -0
CHD8-211ENST00000556833 ZNF248Q8NDW4 579 aa15.04■□□□□ -0
CHD8-211ENST00000556833 SLC20A1Q8WUM9 679 aa15.04■□□□□ -0
CHD8-211ENST00000556833 NT5C3BQ969T7 300 aa15.04■□□□□ -0
CHD8-211ENST00000556833 ATXN7L3BQ96GX2 97 aa15.04■□□□□ -0
CHD8-211ENST00000556833 VCPIP1Q96JH7 1222 aa15.04■□□□□ -0
CHD8-211ENST00000556833 FEM1CQ96JP0 617 aa15.04■□□□□ -0
CHD8-211ENST00000556833 NDST4Q9H3R1 872 aa15.04■□□□□ -0
CHD8-211ENST00000556833 PAXBP1Q9Y5B6 917 aa15.04■□□□□ -0
CHD8-211ENST00000556833 GTF3C3Q9Y5Q9 886 aa15.04■□□□□ -0
CHD8-211ENST00000556833 ANKRD36A6QL64 1941 aa15.04■□□□□ -0
CHD8-211ENST00000556833 A0A1W2PNU3 283 aaPredicted RBP15.03■□□□□ -0
CHD8-211ENST00000556833 NEMP2A6NFY4 417 aa15.03■□□□□ -0
CHD8-211ENST00000556833 C16orf96A6NNT2 1141 aa15.03■□□□□ -0
CHD8-211ENST00000556833 H3BM21 787 aa15.03■□□□□ -0
CHD8-211ENST00000556833 FPGTO14772 594 aa15.03■□□□□ -0
CHD8-211ENST00000556833 AQP9O43315 295 aa15.03■□□□□ -0
CHD8-211ENST00000556833 CD160O95971 181 aa15.03■□□□□ -0
CHD8-211ENST00000556833 PLA2G2AP14555 144 aa15.03■□□□□ -0
CHD8-211ENST00000556833 NME1P15531 152 aaKnown RBP15.03■□□□□ -0
CHD8-211ENST00000556833 ITIH2P19823 946 aa15.03■□□□□ -0
CHD8-211ENST00000556833 GABRB2P47870 512 aa15.03■□□□□ -0
CHD8-211ENST00000556833 VWA3BQ502W6 1294 aa15.03■□□□□ -0
CHD8-211ENST00000556833 PERM1Q5SV97 790 aa15.03■□□□□ -0
CHD8-211ENST00000556833 DPY19L2P1Q6NXN4 242 aa15.03■□□□□ -0
CHD8-211ENST00000556833 KCNE4Q8WWG9 221 aa15.03■□□□□ -0
CHD8-211ENST00000556833 PGAP3Q96FM1 320 aaPredicted RBP15.03■□□□□ -0
CHD8-211ENST00000556833 C1orf74Q96LT6 269 aa15.03■□□□□ -0
CHD8-211ENST00000556833 TUBGCP2Q9BSJ2 902 aa15.03■□□□□ -0
CHD8-211ENST00000556833 CEP44Q9C0F1 390 aa15.03■□□□□ -0
CHD8-211ENST00000556833 POLR1BQ9H9Y6 1135 aa15.03■□□□□ -0
CHD8-211ENST00000556833 PNMA8BQ9ULN7 279 aaPredicted RBP15.03■□□□□ -0
CHD8-211ENST00000556833 HS3ST3A1Q9Y663 406 aa15.03■□□□□ -0
CHD8-211ENST00000556833 SPTY2D1-AS1A0A0U1RR47 76 aa15.02■□□□□ -0
CHD8-211ENST00000556833 TEX51A0A1B0GUA7 166 aa15.02■□□□□ -0
CHD8-211ENST00000556833 FAM72CH0Y354 149 aa15.02■□□□□ -0
CHD8-211ENST00000556833 CSF2P04141 144 aa15.02■□□□□ -0
CHD8-211ENST00000556833 CELA2BP08218 269 aaPredicted RBP15.02■□□□□ -0
CHD8-211ENST00000556833 CDH5P33151 784 aaPredicted RBP15.02■□□□□ -0
CHD8-211ENST00000556833 IGFALSP35858 605 aa15.02■□□□□ -0
CHD8-211ENST00000556833 RABIFP47224 123 aa15.02■□□□□ -0
CHD8-211ENST00000556833 KLK7P49862 253 aa15.02■□□□□ -0
CHD8-211ENST00000556833 DUSP3P51452 185 aaPredicted RBP15.02■□□□□ -0
CHD8-211ENST00000556833 BPIFB4P59827 614 aa15.02■□□□□ -0
CHD8-211ENST00000556833 NOMO3P69849 1222 aa15.02■□□□□ -0
CHD8-211ENST00000556833 CFHR1Q03591 330 aa15.02■□□□□ -0
CHD8-211ENST00000556833 EIF2B5Q13144 721 aaKnown RBP15.02■□□□□ -0
CHD8-211ENST00000556833 LY6DQ14210 128 aa15.02■□□□□ -0
CHD8-211ENST00000556833 DPCR1Q3MIW9 517 aa15.02■□□□□ -0
CHD8-211ENST00000556833 FAM72AQ5TYM5 149 aa15.02■□□□□ -0
CHD8-211ENST00000556833 KLHDC7AQ5VTJ3 777 aa15.02■□□□□ -0
CHD8-211ENST00000556833 BROXQ5VW32 411 aa15.02■□□□□ -0
CHD8-211ENST00000556833 FAM72DQ6L9T8 149 aa15.02■□□□□ -0
CHD8-211ENST00000556833 ZCCHC8Q6NZY4 707 aaKnown RBP15.02■□□□□ -0
CHD8-211ENST00000556833 ZNF605Q86T29 641 aa15.02■□□□□ -0
CHD8-211ENST00000556833 FAM72BQ86X60 149 aa15.02■□□□□ -0
CHD8-211ENST00000556833 CACTIN-AS1Q8N1I8 211 aa15.02■□□□□ -0
CHD8-211ENST00000556833 JOSD2Q8TAC2 188 aa15.02■□□□□ -0
CHD8-211ENST00000556833 SLC30A5Q8TAD4 765 aa15.02■□□□□ -0
CHD8-211ENST00000556833 GPT2Q8TD30 523 aa15.02■□□□□ -0
CHD8-211ENST00000556833 HIC2Q96JB3 615 aa15.02■□□□□ -0
CHD8-211ENST00000556833 ZNF578Q96N58 590 aaPredicted RBP15.02■□□□□ -0
CHD8-211ENST00000556833 KLHL32Q96NJ5 620 aa15.02■□□□□ -0
CHD8-211ENST00000556833 HAPLN3Q96S86 360 aa15.02■□□□□ -0
CHD8-211ENST00000556833 KLF6Q99612 283 aaPredicted RBP15.02■□□□□ -0
CHD8-211ENST00000556833 IL12RB2Q99665 862 aa15.02■□□□□ -0
CHD8-211ENST00000556833 WRAP53Q9BUR4 548 aaKnown RBP15.02■□□□□ -0
CHD8-211ENST00000556833 DUSP23Q9BVJ7 150 aa15.02■□□□□ -0
CHD8-211ENST00000556833 ASCL3Q9NQ33 180 aa15.02■□□□□ -0
CHD8-211ENST00000556833 GPR27Q9NS67 375 aa15.02■□□□□ -0
CHD8-211ENST00000556833 SIRPGQ9P1W8 387 aa15.02■□□□□ -0
CHD8-211ENST00000556833 APOBEC3BQ9UH17 382 aaKnown RBP15.02■□□□□ -0
CHD8-211ENST00000556833 TMEM59LQ9UK28 342 aa15.02■□□□□ -0
CHD8-211ENST00000556833 PIEZO2Q9H5I5 2752 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms