RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 IL36AQ9UHA7 158 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 DNAI1Q9UI46 699 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 SNX11Q9Y5W9 270 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 SNX10Q9Y5X0 201 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 BZW2Q9Y6E2 419 aaKnown RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 THADAQ6YHU6 1953 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 TMCO5BA8MYB1 307 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 PRAMEF26H0Y7S4 382 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 I6L893 689 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 K7ERQ8 282 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 TLR4O00206 839 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 NEMP1O14524 444 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 DAPK3O43293 454 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 PLRG1O43660 514 aaKnown RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 CREB3O43889 395 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 LRIG2O94898 1065 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 PCDH8O95206 1070 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 ITGAVP06756 1048 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 GZMAP12544 262 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 MAT2AP31153 395 aaKnown RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 L1CAMP32004 1257 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 SERPINH1P50454 418 aaKnown RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 HDAC4P56524 1084 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 SNRPD1P62314 119 aaKnown RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 SKOR2Q2VWA4 1001 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 CARD16Q5EG05 197 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 MON1BQ7L1V2 547 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 APTXQ7Z2E3 356 aaKnown RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 IRF2BP2Q7Z5L9 587 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 IQCHQ86VS3 1027 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 MCOLN2Q8IZK6 566 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 MFSD2AQ8NA29 543 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 OR7D4Q8NG98 312 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 JOSD2Q8TAC2 188 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 GRIN3AQ8TCU5 1115 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 ISG20Q96AZ6 181 aaKnown RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 ARHGEF26Q96DR7 871 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 IQCDQ96DY2 449 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 TRIM11Q96F44 468 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 LRIG1Q96JA1 1093 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 FEM1CQ96JP0 617 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 CAMK1GQ96NX5 476 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 ELF4Q99607 663 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 HEPHQ9BQS7 1158 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 SCNM1Q9BWG6 230 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 HSD3B7Q9H2F3 369 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 TNKS2Q9H2K2 1166 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 IL21RQ9HBE5 538 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 TMEM248Q9NWD8 314 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 HECAQ9UBI9 543 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 PCOLCE2Q9UKZ9 415 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 SARDHQ9UL12 918 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 FNDC3AQ9Y2H6 1198 aaKnown RBP7.47□□□□□ -1.21
SCFD1-222ENST00000556768 SCINQ9Y6U3 715 aa7.47□□□□□ -1.21
SCFD1-222ENST00000556768 RALGAPA1Q6GYQ0 2036 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 KIAA1549LQ6ZVL6 1849 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 A0A1B0GTH6 734 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 SYCE3A1L190 88 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 LRRC53A6NM62 1247 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 EIF3CLB5ME19 914 aaKnown RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 FGF10O15520 208 aaPredicted RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 SMAD6O43541 496 aaKnown RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 LATO43561 262 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 BUB1O43683 1085 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 PRPSAP2O60256 369 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 PCDHGA12O60330 932 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 LEFTY1O75610 366 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 POP4O95707 220 aaKnown RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 FTLP02792 175 aaPredicted RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 MYBL1P10243 752 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 AKT2P31751 481 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 HTR7P34969 479 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 DRD3P35462 400 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 CTSKP43235 329 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 UBASH3AP57075 661 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 YBEYP58557 167 aaPredicted RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 RPL7AP62424 266 aaKnown RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 SCAPQ12770 1279 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 PTP4A2Q12974 167 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 SGCGQ13326 291 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 ST3GAL2Q16842 350 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 NAPEPLDQ6IQ20 393 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 TRNP1Q6NT89 227 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 C22orf39Q6P5X5 142 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 DPY19L3Q6ZPD9 716 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 ERN2Q76MJ5 926 aaKnown RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 TMC6Q7Z403 805 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 TRIM69Q86WT6 500 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 CASKIN2Q8WXE0 1202 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 SLC6A18Q96N87 628 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 PSMB7Q99436 277 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 EIF3CQ99613 913 aaKnown RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 HDAC8Q9BY41 377 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 HAUS4Q9H6D7 363 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 AIPL1Q9NZN9 384 aa7.46□□□□□ -1.21
SCFD1-222ENST00000556768 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.46□□□□□ -1.21
SCFD1-222ENST00000556768 CFAP47Q6ZTR5 3102 aa7.46□□□□□ -1.22
SCFD1-222ENST00000556768 ZZEF1O43149 2961 aa7.46□□□□□ -1.22
SCFD1-222ENST00000556768 FAM72CH0Y354 149 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms