RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ZBP1Q9H171 429 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 PRKAG3Q9UGI9 489 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 STARD13Q9Y3M8 1113 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 TCAF1Q9Y4C2 921 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 CDH23Q9H251 3354 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 LILRB3O75022 631 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 BAIAP3O94812 1187 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 CXCL14O95715 111 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 F11P03951 625 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 SPRP35270 261 aaPredicted RBP18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 CTBP1Q13363 440 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 C5orf22Q49AR2 442 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 ADGRF1Q5T601 910 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 DENND6AQ8IWF6 608 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 HS6ST3Q8IZP7 471 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 PPP1R2P1Q96PQ5 205 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 NPHS2Q9NP85 383 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 SNX15Q9NRS6 342 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 ZNF358Q9NW07 568 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 CHD7Q9P2D1 2997 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 FGBP02675 491 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 GJA1P17302 382 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 HOXD9P28356 352 aaPredicted RBP18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 MNAT1P51948 309 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 MTA1Q13330 715 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 N4BP2L1Q5TBK1 243 aaPredicted RBP18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 TMCO4Q5TGY1 634 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 POTEHQ6S545 545 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 PNPLA1Q8N8W4 532 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 GRAMD1AQ96CP6 724 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 EXOC2Q96KP1 924 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 PDFQ9HBH1 243 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 KLHL14Q9P2G3 628 aa18.54■□□□□ 0.56
SDR39U1-220ENST00000556548 ATXN2Q99700 1313 aaKnown RBP18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 RHOCP08134 193 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 LINC00271P0C7V0 271 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 HDCP19113 662 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 GABRR2P28476 465 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 LIMK2P53671 638 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 ZNF177Q13360 481 aaPredicted RBP18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 PDPK2PQ6A1A2 396 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 FATE1Q969F0 183 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 ZFRQ96KR1 1074 aaKnown RBP18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 TSSK1BQ9BXA7 367 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 ZNF395Q9H8N7 513 aaPredicted RBP18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 IL21Q9HBE4 155 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 DCTN4Q9UJW0 460 aa18.53■□□□□ 0.56
SDR39U1-220ENST00000556548 CBX4O00257 560 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 CCL22O00626 93 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 NRG2O14511 850 aaPredicted RBP18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 PRKCGP05129 697 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 CTSAP10619 480 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 ARNTP27540 789 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 SERPINH1P50454 418 aaKnown RBP18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 MPP1Q00013 466 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 SIRPB2Q5JXA9 342 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 ZNF449Q6P9G9 518 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 MAB21L3Q8N8X9 362 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 POLR1EQ9GZS1 481 aaKnown RBP18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 MAGEH1Q9H213 219 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 ATP13A1Q9HD20 1204 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 MKS1Q9NXB0 559 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 EMCNQ9ULC0 261 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 CPQQ9Y646 472 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 LCHNA4D1U4 455 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 CLDN11O75508 207 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 OXCT1P55809 520 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 FRG1Q14331 258 aaKnown RBP18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 CHI3L2Q15782 390 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 CES4AQ5XG92 561 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 ZCCHC23Q6ZST2 131 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 NUDCD3Q8IVD9 361 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 DNAJC5GQ8N7S2 189 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 MUC3BQ9H195 1237 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 SLC39A10Q9ULF5 831 aa18.52■□□□□ 0.56
SDR39U1-220ENST00000556548 PTPRSQ13332 1948 aa18.52■□□□□ 0.55
SDR39U1-220ENST00000556548 AHSGP02765 367 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 EN2P19622 333 aaPredicted RBP18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 GABRB3P28472 473 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 ARCN1P48444 511 aaKnown RBP18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 IRF9Q00978 393 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 GALNT3Q14435 633 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 GRM3Q14832 879 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 RNF219Q5W0B1 726 aaPredicted RBP18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 GAREM2Q75VX8 874 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 CARNMT1Q8N4J0 409 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 VPS39Q96JC1 886 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 KDM4CQ9H3R0 1056 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 VPS45Q9NRW7 570 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 MYLKQ15746 1914 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 BUD23O43709 281 aaKnown RBP18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 TBL1XO60907 577 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 PIRTP0C851 137 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 RGRP47804 291 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 PPP3CCP48454 512 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 TMPRSS15P98073 1019 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 FSCBQ5H9T9 825 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 STXBP5Q5T5C0 1151 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms