RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 KLC2Q9H0B6 622 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 FSCN3Q9NQT6 498 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 DYRK4Q9NR20 520 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 SPTLC3Q9NUV7 552 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 CWC15Q9P013 229 aaKnown RBP11.74□□□□□ -0.53
SLIRP-205ENST00000556310 ACTL7AQ9Y615 435 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 WASF2Q9Y6W5 498 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 TMEM131Q92545 1883 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 A0A1W2PPC4 97 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 DCDC2BA2VCK2 349 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 ARHGAP42A6NI28 874 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 ANKRD36A6QL64 1941 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 PLK4O00444 970 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 TM4SF5O14894 197 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 LATO43561 262 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 BUB1O43683 1085 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 LEFTY1O75610 366 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 PROSCO94903 275 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 RARAP10276 462 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 MAN1A1P33908 653 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 GRIA4P48058 902 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 DNA2P51530 1060 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 ZNF75DP51815 510 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 AFF3P51826 1226 aaKnown RBP11.73□□□□□ -0.53
SLIRP-205ENST00000556310 SNRPD1P62314 119 aaKnown RBP11.73□□□□□ -0.53
SLIRP-205ENST00000556310 PPP2CBP62714 309 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 PPP2CAP67775 309 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 INO80DQ53TQ3 878 aaPredicted RBP11.73□□□□□ -0.53
SLIRP-205ENST00000556310 PIP5KL1Q5T9C9 394 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 AFMIDQ63HM1 303 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 TXNRD3NBQ6F5E7 133 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 LEKR1Q6ZMV7 388 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 MINDY1Q8N5J2 469 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 NPWQ8N729 165 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 TC2NQ8N9U0 490 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 KNL1Q8NG31 2342 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 HSPH1Q92598 858 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 ARRDC3Q96B67 414 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 CELF6Q96J87 481 aaKnown RBP11.73□□□□□ -0.53
SLIRP-205ENST00000556310 LRIG1Q96JA1 1093 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 HEPHQ9BQS7 1158 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 GTPBP2Q9BX10 602 aaKnown RBP11.73□□□□□ -0.53
SLIRP-205ENST00000556310 HDAC8Q9BY41 377 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 ZDHHC6Q9H6R6 413 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 PDFQ9HBH1 243 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 PREBQ9HCU5 417 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 TM9SF3Q9HD45 589 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 SLCO1B1Q9Y6L6 691 aa11.73□□□□□ -0.53
SLIRP-205ENST00000556310 DOCK9Q9BZ29 2069 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 PRAMEF11O60813 436 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 IGSF6O95976 241 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 ITGB7P26010 798 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 NUDT1P36639 197 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 NEK3P51956 506 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 TAS2R38P59533 333 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 RHOAP61586 193 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 FOXK2Q01167 660 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 TEAD4Q15561 434 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 HADHQ16836 314 aaKnown RBP11.72□□□□□ -0.53
SLIRP-205ENST00000556310 ERN2Q76MJ5 926 aaKnown RBP11.72□□□□□ -0.53
SLIRP-205ENST00000556310 POLNQ7Z5Q5 900 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 TRIM69Q86WT6 500 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 GAS2L3Q86XJ1 694 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 ARHGAP12Q8IWW6 846 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 RHOT2Q8IXI1 618 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 LZTR1Q8N653 840 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 RFFLQ8WZ73 363 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 TSC1Q92574 1164 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 GDAP1L1Q96MZ0 367 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 CSPG4P5Q96PW8 444 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 SLC39A8Q9C0K1 460 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 PCDH18Q9HCL0 1135 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 DNAAF2Q9NVR5 837 aaKnown RBP11.72□□□□□ -0.53
SLIRP-205ENST00000556310 RCOR3Q9P2K3 495 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-205ENST00000556310 HECAQ9UBI9 543 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-205ENST00000556310 UBA2Q9UBT2 640 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-205ENST00000556310 INTUQ9ULD6 942 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 SHROOM3Q8TF72 1996 aa11.72□□□□□ -0.53
SLIRP-205ENST00000556310 TRPM6Q9BX84 2022 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TBC1D3DA0A087WVF3 549 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TBC1D3IA0A087WXS9 549 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TBC1D3EA0A087X179 549 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TBC1D3KA0A087X1G2 549 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TBC1D3FA6NER0 549 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TBC1D3LB9A6J9 549 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 RNF103O00237 685 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 KRIT1O00522 736 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 OPHN1O60890 802 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 MTA2O94776 668 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 CER1O95813 267 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TBC1D3HP0C7X1 549 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 SSR1P43307 286 aaKnown RBP11.71□□□□□ -0.53
SLIRP-205ENST00000556310 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.53
SLIRP-205ENST00000556310 CDH6P55285 790 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 RACK1P63244 317 aaKnown RBP11.71□□□□□ -0.53
SLIRP-205ENST00000556310 BNC1Q01954 994 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 KRT81Q14533 505 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 UAP1L1Q3KQV9 507 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 ATXN7L2Q5T6C5 722 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms