RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 COG1Q8WTW3 980 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 ZNF592Q92610 1267 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 MAGOHBQ96A72 148 aaKnown RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 LRRC45Q96CN5 670 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 SIPA1Q96FS4 1042 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 PPP1R16AQ96I34 528 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 RUNDC3BQ96NL0 473 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 PPP1R2P1Q96PQ5 205 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 PHF12Q96QT6 1004 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 TUBGCP5Q96RT8 1024 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 IL12RB2Q99665 862 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 MGME1Q9BQP7 344 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 OSBPL1AQ9BXW6 950 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 FAM126AQ9BYI3 521 aaPredicted RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 RSPH9Q9H1X1 276 aaPredicted RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 TNKS2Q9H2K2 1166 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 NT5MQ9NPB1 228 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 SCUBE2Q9NQ36 999 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 DYRK4Q9NR20 520 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 KLHL8Q9P2G9 620 aaPredicted RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 LHX3Q9UBR4 397 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 FBXO4Q9UKT5 387 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 DRG1Q9Y295 367 aaKnown RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 NCKAP1Q9Y2A7 1128 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 TTLL3Q9Y4R7 772 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 GON4LQ3T8J9 2241 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 ZNF318Q5VUA4 2279 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 CCDC163A0A0D9SF12 145 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 A0A1W2PQ67 120 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 A0A1W2PQF6 199 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 TCRBV7S2A1N4TA0A589 114 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 GOLGA6CA6NDK9 693 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 GOLGA6BA6NDN3 693 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 CCDC188H7C350 402 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 RNF103O00237 685 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 AXIN1O15169 862 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 LIASO43766 372 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 OPHN1O60890 802 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 ZNF217O75362 1048 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 URI1O94763 535 aaPredicted RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 PEX11BO96011 259 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 ADH1BP00325 375 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 ITGAVP06756 1048 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 SERPINF2P08697 491 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 GOLGA6DP0CG33 693 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 XPAP23025 273 aaPredicted RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 NFKBIAP25963 317 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 RBL1P28749 1068 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 SERPINA4P29622 427 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 SLC8A1P32418 973 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 SCNN1BP51168 640 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 BCL2L1Q07817 233 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 SNX1Q13596 522 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 PRPSAP1Q14558 356 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 ATXN7L2Q5T6C5 722 aaPredicted RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 ANO7Q6IWH7 933 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 KIAA1211LQ6NV74 962 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 KIAA1324Q6UXG2 1013 aaKnown RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 TMEM92Q6UXU6 159 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 C4orf22Q6V702 233 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 GSTA5Q7RTV2 222 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 SRLQ86TD4 932 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 KBTBD6Q86V97 674 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 MMAAQ8IVH4 418 aaKnown RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 NDUFAF2Q8N183 169 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 CCDC89Q8N998 374 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 TSEN2Q8NCE0 465 aaKnown RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 GANCQ8TET4 914 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 HMGB4Q8WW32 186 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 C1orf54Q8WWF1 131 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 ATG4AQ8WYN0 398 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 MS4A14Q96JA4 679 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 CAPZA3Q96KX2 299 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 MRGPRX1Q96LB2 322 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 TEKT5Q96M29 485 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 ZNF641Q96N77 438 aaPredicted RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 SPATA13Q96N96 652 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 AGAP3Q96P47 875 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 HHIPQ96QV1 700 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 NUDCD1Q96RS6 583 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 SEMA3CQ99985 751 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 CPEB1Q9BZB8 566 aaKnown RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 IRF2BPLQ9H1B7 796 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 MTG2Q9H4K7 406 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 ZDHHC6Q9H6R6 413 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 ATP13A3Q9H7F0 1226 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 PRMT8Q9NR22 394 aaPredicted RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 GOLGA6AQ9NYA3 693 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 EBF1Q9UH73 591 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 IL36AQ9UHA7 158 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 DNPEPQ9ULA0 475 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 PPM1HQ9ULR3 514 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 R3HDM2Q9Y2K5 976 aaKnown RBP7.74□□□□□ -1.17
TDP1-214ENST00000556063 ACTL7AQ9Y615 435 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 SDK1Q7Z5N4 2213 aa7.74□□□□□ -1.17
TDP1-214ENST00000556063 ANTXRLA6NF34 631 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 C5orf60A6NFR6 353 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 ESPNB1AK53 854 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 KPNA3O00505 521 aaPredicted RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 ZNF185O15231 689 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms