RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SDR16C5Q8N3Y7 309 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 C3orf20Q8ND61 904 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 SNIP1Q8TAD8 396 aaKnown RBP7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 BAP1Q92560 729 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 FGF11Q92914 225 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 TBC1D31Q96DN5 1066 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 ERGIC2Q96RQ1 377 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 EIF3CQ99613 913 aaKnown RBP7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 SELENOOQ9BVL4 669 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 CPEB1Q9BZB8 566 aaKnown RBP7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 VPS16Q9H269 839 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 METTL5Q9NRN9 209 aaKnown RBP7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 ANO10Q9NW15 660 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 ADAM22Q9P0K1 906 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 DKK3Q9UBP4 350 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 LIMA1Q9UHB6 759 aaKnown RBP7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 MYO6Q9UM54 1294 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 SIK3Q9Y2K2 1263 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 ZFYVE26Q68DK2 2539 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 PLXNA2O75051 1894 aa7.92□□□□□ -1.14
PTCSC3-201ENST00000556013 CELSR3Q9NYQ7 3312 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 TCRBV5S1A1TA0A578 114 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 CFAP69A5D8W1 941 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 FAM149AA5PLN7 773 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 C16orf96A6NNT2 1141 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 H3BM21 787 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 FPGTO14772 594 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 AREL1O15033 823 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 DXOO77932 396 aaKnown RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 MT-CO3P00414 261 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 NME1P15531 152 aaKnown RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 DESP17661 470 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 GPD1P21695 349 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 RFC1P35251 1148 aaPredicted RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 ACTN2P35609 894 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 PEX5P50542 639 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 DNA2P51530 1060 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 ZNF135P52742 658 aaPredicted RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 ZNF143P52747 638 aaPredicted RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 COPB1P53618 953 aaKnown RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 HDAC4P56524 1084 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 PFN3P60673 137 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 DAB2P98082 770 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 INSM1Q01101 510 aaPredicted RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 C1QBPQ07021 282 aaKnown RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 AGERQ15109 404 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 SYCP1Q15431 976 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 POM121L1PQ3SYA9 428 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 PARP15Q460N3 678 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 SOWAHCQ53LP3 525 aaPredicted RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 C2CD6Q53TS8 623 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 HSP90AA4PQ58FG1 418 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 CDCP2Q5VXM1 449 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 C19orf48Q6RUI8 117 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 IGF2-ASQ6U949 168 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 GCNT7Q6ZNI0 430 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 LRRC69Q6ZNQ3 347 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 PARGQ86W56 976 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 UMODL1-AS1Q8N2C9 162 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 EMC1Q8N766 993 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 RTL3Q8N8U3 475 aaKnown RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 NEK11Q8NG66 645 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 OR13H1Q8NG92 308 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 WDR48Q8TAF3 677 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 HNRNPLLQ8WVV9 542 aaKnown RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 ZNF578Q96N58 590 aaPredicted RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 KLF6Q99612 283 aaPredicted RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 NCAPGQ9BPX3 1015 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 C1QTNF7Q9BXJ2 289 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 TTYH3Q9C0H2 523 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 TNKS2Q9H2K2 1166 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 CATSPERBQ9H7T0 1116 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 TMPRSS4Q9NRS4 437 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 FANCLQ9NW38 375 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 TAB2Q9NYJ8 693 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 SNX10Q9Y5X0 201 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 AK5Q9Y6K8 562 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 DOCK9Q9BZ29 2069 aa7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 DSPP15924 2871 aaKnown RBP7.91□□□□□ -1.14
PTCSC3-201ENST00000556013 EME2A4GXA9 379 aaPredicted RBP7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 ANKRD62A6NC57 917 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 POM121BA6NF01 834 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 TMEM110-MUSTN1A8MSY1 372 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 FAM72CH0Y354 149 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 K7ESM1 405 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 RNF103O00237 685 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 FGF10O15520 208 aaPredicted RBP7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 TM7SF2O76062 418 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 PRLRP16471 622 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 FERP16591 822 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 CDK11BP21127 795 aaKnown RBP7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 ACVRL1P37023 503 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 ABCG1P45844 678 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 CSNK1DP48730 415 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 NUMBP49757 651 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 BLKP51451 505 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 ERVPABLB-1P60509 514 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 NSUN2Q08J23 767 aaKnown RBP eCLIP7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 FGL2Q14314 439 aa7.9□□□□□ -1.14
PTCSC3-201ENST00000556013 FZD2Q14332 565 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms