RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SMAD6O43541 496 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 ATP9BO43861 1147 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 IGSF6O95976 241 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 TNFRSF8P28908 595 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 TNNT3P45378 269 aaPredicted RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 MAPK8P45983 427 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 RECQLP46063 649 aaPredicted RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 SCNN1BP51168 640 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 ITGA8P53708 1063 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 GEMP55040 296 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 PLTPP55058 493 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 MAXP61244 160 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 SNRPD1P62314 119 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 SARNPP82979 210 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 CDK16Q00536 496 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 DSC2Q02487 901 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 MESP2Q0VG99 397 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 GRSF1Q12849 480 aaKnown RBP eCLIP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 MPP3Q13368 585 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 NAA30Q147X3 362 aaPredicted RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 FNDC3BQ53EP0 1204 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 RALGPS1Q5JS13 557 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 RNASEH2BQ5TBB1 312 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 NAIF1Q69YI7 327 aaPredicted RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 ALG1LQ6GMV1 187 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 WDR93Q6P2C0 686 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 PCDH20Q8N6Y1 951 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 EIF1ADQ8N9N8 165 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 KDM1BQ8NB78 822 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 SORCS1Q8WY21 1168 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 CPT1BQ92523 772 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 IMP4Q96G21 291 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 GDAP1L1Q96MZ0 367 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 NUDCD1Q96RS6 583 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 SEMA3CQ99985 751 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 PARD6BQ9BYG5 372 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 EIF2B3Q9NR50 452 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 GRHL1Q9NZI5 618 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 LHX3Q9UBR4 397 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 SLCO3A1Q9UIG8 710 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 SORCS3Q9UPU3 1222 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 SHOC2Q9UQ13 582 aa11.19□□□□□ -0.62
TMEM260-208ENST00000555905 UQCRHLA0A096LP55 91 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 MAN2B1O00754 1011 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 NPC1O15118 1278 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 MUSKO15146 869 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 INSIG1O15503 277 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 AP2A1O95782 977 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 GSRP00390 522 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 UQCRHP07919 91 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 SERPINF2P08697 491 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 TPSB2P20231 275 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 DRD1P21728 446 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 CA4P22748 312 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 CD86P42081 329 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 MAGEA6P43360 314 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 CARSP49589 748 aaKnown RBP11.18□□□□□ -0.62
TMEM260-208ENST00000555905 AP1S1P61966 158 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 NIPAL4Q0D2K0 466 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 KCNJ11Q14654 390 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 PON2Q15165 354 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 TRADDQ15628 312 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 TPSAB1Q15661 275 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 DLG2Q15700 870 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 SLC14A2Q15849 920 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 PTPRNQ16849 979 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 SLC44A4Q53GD3 710 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 DGKKQ5KSL6 1271 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 ATXN7L2Q5T6C5 722 aaPredicted RBP11.18□□□□□ -0.62
TMEM260-208ENST00000555905 HIBCHQ6NVY1 386 aaPredicted RBP11.18□□□□□ -0.62
TMEM260-208ENST00000555905 C22orf39Q6P5X5 142 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 PPP1R21Q6ZMI0 780 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 SRLQ86TD4 932 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 RYBPQ8N488 228 aaPredicted RBP11.18□□□□□ -0.62
TMEM260-208ENST00000555905 OR2AP1Q8NGE2 309 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 SPATA22Q8NHS9 363 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.18□□□□□ -0.62
TMEM260-208ENST00000555905 PRCCQ92733 491 aaPredicted RBP11.18□□□□□ -0.62
TMEM260-208ENST00000555905 ART4Q93070 314 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 EXOC2Q96KP1 924 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 MRGPRX3Q96LB0 322 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 ASB2Q96Q27 587 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 RBM15Q96T37 977 aaKnown RBP eCLIP11.18□□□□□ -0.62
TMEM260-208ENST00000555905 TM6SF2Q9BZW4 377 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 TNKS2Q9H2K2 1166 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 LRRC40Q9H9A6 602 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 VPS45Q9NRW7 570 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 UBP1Q9NZI7 540 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 MTRF1LQ9UGC7 380 aaKnown RBP11.18□□□□□ -0.62
TMEM260-208ENST00000555905 FAM153AQ9UHL3 310 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 STARD13Q9Y3M8 1113 aa11.18□□□□□ -0.62
TMEM260-208ENST00000555905 TTC24A2A3L6 582 aaPredicted RBP11.17□□□□□ -0.62
TMEM260-208ENST00000555905 TTC34A8MYJ7 566 aa11.17□□□□□ -0.62
TMEM260-208ENST00000555905 AP3B1O00203 1094 aa11.17□□□□□ -0.62
TMEM260-208ENST00000555905 PMPCBO75439 489 aa11.17□□□□□ -0.62
TMEM260-208ENST00000555905 CR2P20023 1033 aa11.17□□□□□ -0.62
TMEM260-208ENST00000555905 RGRP47804 291 aa11.17□□□□□ -0.62
TMEM260-208ENST00000555905 CSNK1DP48730 415 aa11.17□□□□□ -0.62
TMEM260-208ENST00000555905 VSNL1P62760 191 aa11.17□□□□□ -0.62
TMEM260-208ENST00000555905 SKOR1P84550 965 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms