RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 CDH6P55285 790 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 BNC1Q01954 994 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 MESDQ14696 234 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 UAP1L1Q3KQV9 507 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 INO80DQ53TQ3 878 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-219ENST00000555563 TBC1D3GQ6DHY5 549 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 TBC1D3CQ6IPX1 549 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 TMCO3Q6UWJ1 677 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 ARHGAP36Q6ZRI8 547 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 ERN2Q76MJ5 926 aaKnown RBP13.94□□□□□ -0.18
SHMT2-219ENST00000555563 PARS2Q7L3T8 475 aaKnown RBP13.94□□□□□ -0.18
SHMT2-219ENST00000555563 TP53INP2Q8IXH6 220 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 TBC1D3Q8IZP1 549 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-219ENST00000555563 MINDY1Q8N5J2 469 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 SLC35G2Q8TBE7 412 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 RFFLQ8WZ73 363 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 EXOC2Q96KP1 924 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 HDAC8Q9BY41 377 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 KDM4CQ9H3R0 1056 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 LCMT1Q9UIC8 334 aa13.94□□□□□ -0.18
SHMT2-219ENST00000555563 A0A1B0GVT2 93 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 MTA2O94776 668 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 IGSF6O95976 241 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 CD48P09326 243 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 MAT2AP31153 395 aaKnown RBP13.93□□□□□ -0.18
SHMT2-219ENST00000555563 GRIA4P48058 902 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 CSNK1EP49674 416 aaKnown RBP13.93□□□□□ -0.18
SHMT2-219ENST00000555563 ARSEP51690 589 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 NEK3P51956 506 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 DPYSL3Q14195 570 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 CYTH1Q15438 398 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 MYLK3Q32MK0 819 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 ATP13A4Q4VNC1 1196 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 TRIM69Q86WT6 500 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 RHOT2Q8IXI1 618 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 LZTR1Q8N653 840 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 FAM71BQ8TC56 605 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 LRIG1Q96JA1 1093 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 SP110Q9HB58 689 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 PREBQ9HCU5 417 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 RCOR3Q9P2K3 495 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-219ENST00000555563 INTUQ9ULD6 942 aa13.93□□□□□ -0.18
SHMT2-219ENST00000555563 TPX2Q9ULW0 747 aaKnown RBP13.93□□□□□ -0.18
SHMT2-219ENST00000555563 KRT37O76014 449 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 POP4O95707 220 aaKnown RBP13.92□□□□□ -0.18
SHMT2-219ENST00000555563 UGT2B4P06133 528 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 KRT7P08729 469 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 ADRB3P13945 408 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 FECHP22830 423 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 IL4RP24394 825 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 RACK1P63244 317 aaKnown RBP13.92□□□□□ -0.18
SHMT2-219ENST00000555563 CCDC15Q0P6D6 951 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 TEAD4Q15561 434 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 ZNF805Q5CZA5 627 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 FBXL19Q6PCT2 694 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 SERAC1Q96JX3 654 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 PANX2Q96RD6 677 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 ZNF670Q9BS34 389 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 CALN1Q9BXU9 219 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 OSBPL1AQ9BXW6 950 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 ZDHHC5Q9C0B5 715 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 IPO11Q9UI26 975 aaKnown RBP13.92□□□□□ -0.18
SHMT2-219ENST00000555563 TP53BP1Q12888 1972 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-219ENST00000555563 CACNA1EQ15878 2313 aa13.92□□□□□ -0.18
SHMT2-219ENST00000555563 A0A1W2PQU0 124 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 SOWAHDA6NJG2 315 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 WNT9AO14904 365 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 INSIG1O15503 277 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 MFSD11O43934 449 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 OPHN1O60890 802 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 RNGTTO60942 597 aaKnown RBP13.91□□□□□ -0.18
SHMT2-219ENST00000555563 GJB3O75712 270 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 PALMO75781 387 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 LCA5LO95447 670 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 WNT1P04628 370 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 SERPINB6P35237 376 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 ABL2P42684 1182 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 RGRP47804 291 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 IL10RBQ08334 325 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 TCEAL1Q15170 157 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 KIF19Q2TAC6 998 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 PPM1JQ5JR12 505 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 NAPEPLDQ6IQ20 393 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 GDPD4Q6W3E5 623 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 ADAT2Q7Z6V5 191 aaKnown RBP13.91□□□□□ -0.18
SHMT2-219ENST00000555563 CCDC170Q8IYT3 715 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 KCTD6Q8NC69 237 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 CINPQ9BW66 212 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-219ENST00000555563 IL21RQ9HBE5 538 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 AASDHPPTQ9NRN7 309 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 DNAAF2Q9NVR5 837 aaKnown RBP13.91□□□□□ -0.18
SHMT2-219ENST00000555563 ITM2BQ9Y287 266 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 ANKRD6Q9Y2G4 727 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 FNDC3AQ9Y2H6 1198 aaKnown RBP13.91□□□□□ -0.18
SHMT2-219ENST00000555563 FADS3Q9Y5Q0 445 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 SNX11Q9Y5W9 270 aa13.91□□□□□ -0.18
SHMT2-219ENST00000555563 C16orf96A6NNT2 1141 aa13.9□□□□□ -0.18
SHMT2-219ENST00000555563 VILLO15195 856 aa13.9□□□□□ -0.18
SHMT2-219ENST00000555563 SPINT1O43278 529 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms