RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 FIBINQ8TAL6 211 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 TSGA13Q96PP4 275 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 BFARQ9NZS9 450 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 ZC3H7BQ9UGR2 993 aaKnown RBP10.34□□□□□ -0.75
NEK9-205ENST00000555405 SLC25A13Q9UJS0 675 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 PCDHB9Q9Y5E1 797 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 DOCK8Q8NF50 2099 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 GOLGA6CA6NDK9 693 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 GOLGA6BA6NDN3 693 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 PIGNO95427 931 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 SHBGP04278 402 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 SERPINF2P08697 491 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 GOLGA6DP0CG33 693 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 SLC8A1P32418 973 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 DRG2P55039 364 aaKnown RBP10.34□□□□□ -0.75
NEK9-205ENST00000555405 CYTH1Q15438 398 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 CTC1Q2NKJ3 1217 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 KRT71Q3SY84 523 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 ARTNQ5T4W7 220 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 IGDCC3Q8IVU1 814 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 UNC5BQ8IZJ1 945 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 CPXM2Q8N436 756 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 GBA3Q9H227 469 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 PRDM16Q9HAZ2 1276 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 HEBP1Q9NRV9 189 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 GOLGA6AQ9NYA3 693 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 POLR3GO15318 223 aaPredicted RBP10.34□□□□□ -0.75
NEK9-205ENST00000555405 ANXA9O76027 345 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 ECT2LQ008S8 904 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 MFSD6LQ8IWD5 586 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 ATXN7L3BQ96GX2 97 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 VAT1Q99536 393 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 FBRSL1Q9HCM7 1045 aaKnown RBP10.34□□□□□ -0.75
NEK9-205ENST00000555405 TMEM51Q9NW97 253 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 HECAQ9UBI9 543 aaPredicted RBP10.34□□□□□ -0.75
NEK9-205ENST00000555405 RAD54BQ9Y620 910 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 TTC34A8MYJ7 566 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 FOXO6A8MYZ6 492 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 LATS1O95835 1130 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 GEMP55040 296 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 PTPRCAPQ14761 206 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 LONRF1Q17RB8 773 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 HSP90B2PQ58FF3 399 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 ACBD5Q5T8D3 534 aaPredicted RBP10.33□□□□□ -0.76
NEK9-205ENST00000555405 GRAMD4Q6IC98 578 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 PTCRAQ6ISU1 281 aaPredicted RBP10.33□□□□□ -0.76
NEK9-205ENST00000555405 SERPINA13PQ6UXR4 307 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 CHPFQ8IZ52 775 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 ZCCHC9Q8N567 271 aaKnown RBP10.33□□□□□ -0.76
NEK9-205ENST00000555405 FLCNQ8NFG4 579 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 NXPE3Q969Y0 559 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 ZIM3Q96PE6 472 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 IL12RB2Q99665 862 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 HPS4Q9NQG7 708 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 SYBUQ9NX95 663 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 CACNA2D2Q9NY47 1150 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 NINJ2Q9NZG7 142 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 LMCD1Q9NZU5 365 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 NDRG2Q9UN36 371 aaKnown RBP10.33□□□□□ -0.76
NEK9-205ENST00000555405 AAR2Q9Y312 384 aaKnown RBP10.33□□□□□ -0.76
NEK9-205ENST00000555405 TP73O15350 636 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 PDHA1P08559 390 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 SAT1P21673 171 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 GJA4P35212 333 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 TIE1P35590 1138 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 ABL2P42684 1182 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 ABCG1P45844 678 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 CAV1Q03135 178 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 KCNJ11Q14654 390 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 SLMAPQ14BN4 828 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 TMEM215Q68D42 235 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 TMEM184AQ6ZMB5 413 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 PRPF39Q86UA1 669 aaKnown RBP10.33□□□□□ -0.76
NEK9-205ENST00000555405 LRRC49Q8IUZ0 686 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 CPA6Q8N4T0 437 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 ZNF669Q96BR6 464 aaPredicted RBP10.33□□□□□ -0.76
NEK9-205ENST00000555405 TBL1YQ9BQ87 522 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 FUT8Q9BYC5 575 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 CHRAC1Q9NRG0 131 aa10.33□□□□□ -0.76
NEK9-205ENST00000555405 PRR23AA6NEV1 266 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 PRRT4C9JH25 899 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 UGT2B4P06133 528 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 ATP5BP06576 529 aaKnown RBP10.32□□□□□ -0.76
NEK9-205ENST00000555405 IL9P15248 144 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 DGKKQ5KSL6 1271 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 IER5LQ5T953 404 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 CAND1Q86VP6 1230 aaKnown RBP10.32□□□□□ -0.76
NEK9-205ENST00000555405 PPM1NQ8N819 430 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 DCAF4L2Q8NA75 395 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 MSLNLQ96KJ4 702 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 KCNK12Q9HB15 430 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 BPIFA1Q9NP55 256 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 RPS6KL1Q9Y6S9 549 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 KPNA3O00505 521 aaPredicted RBP10.32□□□□□ -0.76
NEK9-205ENST00000555405 CHADO15335 359 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 PEX11BO96011 259 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 PFKLP17858 780 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 FCARP24071 287 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 SEMA5AQ13591 1074 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 HABP4Q5JVS0 413 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms