RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 CFAP221Q4G0U5 840 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 PABPC1LQ4VXU2 614 aaKnown RBP4.41□□□□□ -1.7
CPSF2-204ENST00000555244 COBLL1Q53SF7 1204 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 FAM171BQ6P995 826 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 DSTYKQ6XUX3 929 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 MTSS1LQ765P7 747 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 GRASPQ7Z6J2 395 aaPredicted RBP4.41□□□□□ -1.7
CPSF2-204ENST00000555244 TMC8Q8IU68 726 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 WDR49Q8IV35 697 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 DRC7Q8IY82 874 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 CMTM4Q8IZR5 234 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 TMEM86AQ8N2M4 240 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 PQLC1Q8N2U9 271 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 XXYLT1Q8NBI6 393 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 OR5M3Q8NGP4 307 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 OR10T2Q8NGX3 314 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 SPATA20Q8TB22 786 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 ITFG1Q8TB96 612 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 SPPL2BQ8TCT7 592 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 PSMG2Q969U7 264 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 ELSPBP1Q96BH3 223 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 DHX58Q96C10 678 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 NEIL1Q96FI4 390 aaPredicted RBP4.41□□□□□ -1.7
CPSF2-204ENST00000555244 ZNF560Q96MR9 790 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 ACBD6Q9BR61 282 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 FAM213AQ9BRX8 229 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 NELFAQ9H3P2 528 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 ZHX3Q9H4I2 956 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 TMEM140Q9NV12 185 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 OBP2AQ9NY56 170 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 RBAKQ9NYW8 714 aaPredicted RBP4.41□□□□□ -1.7
CPSF2-204ENST00000555244 DLGAP2Q9P1A6 1054 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 CEP72Q9P209 647 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.41□□□□□ -1.7
CPSF2-204ENST00000555244 TRPS1Q9UHF7 1281 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 TRAF3IP3Q9Y228 551 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 POLHQ9Y253 713 aa4.41□□□□□ -1.7
CPSF2-204ENST00000555244 PTPRZ1P23471 2315 aaPredicted RBP4.4□□□□□ -1.7
CPSF2-204ENST00000555244 CFAP54Q96N23 3096 aa4.4□□□□□ -1.7
CPSF2-204ENST00000555244 FAM186AA6NE01 2351 aa4.4□□□□□ -1.7
CPSF2-204ENST00000555244 A0A1W2PRX2 142 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 SHISA7A6NL88 538 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 IKBKBO14920 756 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CCL16O15467 120 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 TEX33O43247 280 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CDC14BO60729 498 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 HSP90AA1P07900 732 aaKnown RBP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 HAPLN1P10915 354 aaPredicted RBP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 GLULP15104 373 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 AOC1P19801 751 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CR2P20023 1033 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 WARSP23381 471 aaKnown RBP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 ATICP31939 592 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CCR2P41597 374 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 IL12RB1P42701 662 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 MATR3P43243 847 aaKnown RBP eCLIP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 MAGEA11P43364 429 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 SYKP43405 635 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 LHX1P48742 406 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 NDUFA8P51970 172 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 AP3M2P53677 418 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 TBX4P57082 545 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 ASIC1P78348 528 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 NTHL1P78549 312 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CYP24A1Q07973 514 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 TWF1Q12792 350 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 TCF15Q12870 199 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 STK4Q13043 487 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 ZNF267Q14586 743 aaPredicted RBP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 SNRNP35Q16560 246 aaKnown RBP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 SLC5A9Q2M3M2 681 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 SOWAHAQ2M3V2 549 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 C3orf36Q3SXR2 165 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 ZCWPW2Q504Y3 356 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CCDC157Q569K6 752 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 WSCD1Q658N2 575 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 ARMCX5Q6P1M9 558 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 FOXR2Q6PJQ5 311 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 PARM1Q6UWI2 310 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 KRBA2Q6ZNG9 492 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 Q6ZVL8 140 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 TRAPPC11Q7Z392 1133 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 DNAJB7Q7Z6W7 309 aaPredicted RBP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 USP37Q86T82 979 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CBWD2Q8IUF1 395 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 SUGP1Q8IWZ8 645 aaKnown RBP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CEP57L1Q8IYX8 460 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 DCP1BQ8IZD4 617 aaKnown RBP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 SYCP3Q8IZU3 236 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 THEM5Q8N1Q8 247 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 GUF1Q8N442 669 aaKnown RBP4.4□□□□□ -1.71
CPSF2-204ENST00000555244 PDCL2Q8N4E4 241 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CSGALNACT2Q8N6G5 542 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 ATAD1Q8NBU5 361 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 KIAA0895Q8NCT3 520 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 PRSS33Q8NF86 280 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 ENGASEQ8NFI3 743 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 OR5B17Q8NGF7 314 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 OR2I1PQ8NGU4 316 aa4.4□□□□□ -1.71
CPSF2-204ENST00000555244 CCHCR1Q8TD31 782 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms