RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 GAD2Q05329 585 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 WLSQ5T9L3 541 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 PIK3R6Q5UE93 754 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 SCYL2Q6P3W7 929 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 SLC26A11Q86WA9 606 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 YAF2Q8IY57 180 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 CCDC185Q8N715 623 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 PCDH19Q8TAB3 1148 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 LRRC37BQ96QE4 947 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 SNRNP25Q9BV90 132 aaKnown RBP17.68■□□□□ 0.42
SHOX-204ENST00000554971 TKTL2Q9H0I9 626 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 RAB6BQ9NRW1 208 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 THG1LQ9NWX6 298 aaKnown RBP17.68■□□□□ 0.42
SHOX-204ENST00000554971 TCRBV9S1A1TA0A576 114 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 SHISA7A6NL88 538 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 KCNN4O15554 427 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 TGDSO95455 350 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 F9P00740 461 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 CYP17A1P05093 508 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 TROVE2P10155 538 aaKnown RBP eCLIP17.67■□□□□ 0.42
SHOX-204ENST00000554971 TPSB2P20231 275 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 TPSAB1Q15661 275 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 PARP6Q2NL67 630 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 GAB4Q2WGN9 574 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 SLC45A4Q5BKX6 768 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 NPNTQ6UXI9 565 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 TBC1D1Q86TI0 1168 aaPredicted RBP17.67■□□□□ 0.42
SHOX-204ENST00000554971 TMEM25Q86YD3 366 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 TTC8Q8TAM2 541 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 IRF7Q92985 503 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 RMDN2Q96LZ7 410 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 TUBB6Q9BUF5 446 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 WDCPQ9H6R7 721 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 TBC1D14Q9P2M4 693 aa17.67■□□□□ 0.42
SHOX-204ENST00000554971 HACD1B0YJ81 288 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 ACSL4O60488 711 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 BANF1O75531 89 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 DHRS4L1P0CG22 281 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 PRKCHP24723 683 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 SGSHP51688 502 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 LY6G5CQ5SRR4 150 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 ADGRF1Q5T601 910 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 RFWD3Q6PCD5 774 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 C1orf228Q6PIY5 440 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 FAM47EQ6ZV65 393 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 INPP5DQ92835 1189 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 AZIN2Q96A70 460 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 MTBPQ96DY7 904 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 BTN2A3PQ96KV6 586 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 TMEM237Q96Q45 408 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 TRPV5Q9NQA5 729 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 HEBP1Q9NRV9 189 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 ETNK2Q9NVF9 386 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 CHMP2BQ9UQN3 213 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 PAGE1O75459 146 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 KRT37O76014 449 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 APOEP02649 317 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 SOX9P48436 509 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 CDK16Q00536 496 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 MGAT5Q09328 741 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 RUNX3Q13761 415 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 PDGFRLQ15198 375 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 DHCR24Q15392 516 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 PREPLQ4J6C6 727 aaPredicted RBP17.66■□□□□ 0.42
SHOX-204ENST00000554971 MS4A13Q5J8X5 152 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 BRMS1LQ5PSV4 323 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 TTC39BQ5VTQ0 682 aaPredicted RBP17.66■□□□□ 0.42
SHOX-204ENST00000554971 NAIF1Q69YI7 327 aaPredicted RBP17.66■□□□□ 0.42
SHOX-204ENST00000554971 LRRC6Q86X45 466 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 TRIM42Q8IWZ5 723 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 TCP10LQ8TDR4 215 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 ATP2A3Q93084 1043 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 RNF34Q969K3 372 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 OTUB2Q96DC9 234 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 APOPT1Q96IL0 206 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 NOD2Q9HC29 1040 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 XAB2Q9HCS7 855 aaKnown RBP17.66■□□□□ 0.42
SHOX-204ENST00000554971 GRID1Q9ULK0 1009 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 ZNF510Q9Y2H8 683 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 SNX10Q9Y5X0 201 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 HS3ST4Q9Y661 456 aa17.66■□□□□ 0.42
SHOX-204ENST00000554971 SLC9A3R1O14745 358 aaPredicted RBP17.65■□□□□ 0.42
SHOX-204ENST00000554971 KLF11O14901 512 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 LATS1O95835 1130 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 SLC2A3P11169 496 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 EZRP15311 586 aaKnown RBP17.65■□□□□ 0.42
SHOX-204ENST00000554971 RBL1P28749 1068 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 L1CAMP32004 1257 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 SARNPP82979 210 aaKnown RBP17.65■□□□□ 0.42
SHOX-204ENST00000554971 TPGS1Q6ZTW0 290 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 SH2D5Q6ZV89 423 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 CCDC91Q7Z6B0 441 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 AGGF1Q8N302 714 aaeCLIP17.65■□□□□ 0.42
SHOX-204ENST00000554971 C10orf82Q8WW14 230 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 PRICKLE1Q96MT3 831 aaPredicted RBP17.65■□□□□ 0.42
SHOX-204ENST00000554971 SAR1AQ9NR31 198 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 SPHK2Q9NRA0 654 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 MKS1Q9NXB0 559 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 NUP205Q92621 2012 aa17.65■□□□□ 0.42
SHOX-204ENST00000554971 ADRA1BP35368 520 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms