RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 P4HA1P13674 534 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PRKACAP17612 351 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CCND1P24385 295 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CD86P42081 329 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 AVPR1BP47901 424 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PPM1FP49593 454 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 GPR15P49685 360 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ARHGDIBP52566 201 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 POLE2P56282 527 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 NRG3P56975 720 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 EVCP57679 992 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 VBP1P61758 197 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CYP4F2P78329 520 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 KRT85P78386 507 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ACY1Q03154 408 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PPFIA1Q13136 1202 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CYLC2Q14093 348 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 TRIM25Q14258 630 aaKnown RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 HLTFQ14527 1009 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PCBP1Q15365 356 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 STK11Q15831 433 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 GEN1Q17RS7 908 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 TKFCQ3LXA3 575 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CFAP221Q4G0U5 840 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CDONQ4KMG0 1287 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ZCWPW2Q504Y3 356 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PRR16Q569H4 304 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 DACT2Q5SW24 774 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 FAM102AQ5T9C2 384 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 SYDE2Q5VT97 1194 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 METRNLQ641Q3 311 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 SPECC1LQ69YQ0 1117 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 OR7E24Q6IFN5 339 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ZSCAN25Q6NSZ9 544 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 EFCAB12Q6NXP0 572 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 METTL2BQ6P1Q9 378 aaKnown RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 FAM122CQ6P4D5 195 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 FAM171BQ6P995 826 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 SLC30A10Q6XR72 485 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ZER1Q7Z7L7 766 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 GLCCI1Q86VQ1 547 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PASD1Q8IV76 773 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 SLC41A1Q8IVJ1 513 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 GLB1L2Q8IW92 636 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ZNF610Q8N9Z0 462 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CDC26Q8NHZ8 85 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ANGPTL6Q8NI99 470 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CAGE1Q8TC20 777 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 MGARPQ8TDB4 240 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 NCLNQ969V3 563 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ZBED3Q96IU2 234 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 HIC2Q96JB3 615 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PGBD1Q96JS3 809 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CNDP1Q96KN2 507 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 TNIP3Q96KP6 325 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 FAM167AQ96KS9 214 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ART5Q96L15 291 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CCDC138Q96M89 665 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 COQ10AQ96MF6 247 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 GDAP1L1Q96MZ0 367 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ASB2Q96Q27 587 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 COQ7Q99807 217 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 BPIFA3Q9BQP9 254 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 SHCBP1LQ9BZQ2 653 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 EDEM3Q9BZQ6 932 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 KRT23Q9C075 422 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 WNT5BQ9H1J7 359 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 DEFB129Q9H1M3 183 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 C11orf49Q9H6J7 331 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 IFT22Q9H7X7 185 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 UCK1Q9HA47 277 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 RSAD1Q9HA92 442 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PDE11AQ9HCR9 933 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ALG13Q9NP73 1137 aaKnown RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 C12orf4Q9NQ89 552 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 TBC1D22BQ9NU19 505 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 FAIMQ9NVQ4 179 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 BABAM1Q9NWV8 329 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ASIC3Q9UHC3 531 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 TAGLN3Q9UI15 199 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PRSS50Q9UI38 385 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CLCA2Q9UQC9 943 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 NFE2L3Q9Y4A8 694 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PLXNB2O15031 1838 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 MYO9BQ13459 2157 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 MED23Q9ULK4 1368 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 PFASO15067 1338 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 WDR91A4D1P6 747 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 MARCH11A6NNE9 402 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 B5MCH6 92 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 STX16-NPEPL1H3BU86 382 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 K7ENM7 598 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 VWA5AO00534 786 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 KPNA5O15131 536 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 EIF3HO15372 352 aaKnown RBP eCLIP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 TSPAN6O43657 245 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CCNT1O60563 726 aaKnown RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 ITGA10O75578 1167 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms