RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ERN2Q76MJ5 926 aaKnown RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3Q8IZP1 549 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 OR2AP1Q8NGE2 309 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 OR2I1PQ8NGU4 316 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 CTNNBL1Q8WYA6 563 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 ARRDC3Q96B67 414 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 GDAP1L1Q96MZ0 367 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TM6SF2Q9BZW4 377 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 SLC32A1Q9H598 525 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 LRRC19Q9H756 370 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 ZWILCHQ9H900 591 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 LCMT1Q9UIC8 334 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 DMTF1Q9Y222 760 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 ACTL7AQ9Y615 435 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TMEM131Q92545 1883 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TPRP12270 2363 aaKnown RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 A0A1B0GVT2 93 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 GOLGA6L9A6NEM1 432 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 H3BRJ5 948 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 VILLO15195 856 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 DAPK3O43293 454 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 IGSF6O95976 241 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 ZNF883P0CG24 379 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 CEACAM1P13688 526 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 IL1R2P27930 398 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 ARL4AP40617 200 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 CSNK1EP49674 416 aaKnown RBP13.28□□□□□ -0.28
SHMT2-211ENST00000554310 NEK3P51956 506 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 ADKP55263 362 aaKnown RBP13.28□□□□□ -0.28
SHMT2-211ENST00000554310 BNC1Q01954 994 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 DPYSQ14117 519 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 KIF19Q2TAC6 998 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 ASTE1Q2TB18 679 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-211ENST00000554310 SETMARQ53H47 684 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-211ENST00000554310 ARSIQ5FYB1 569 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 NAPEPLDQ6IQ20 393 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 NEK5Q6P3R8 708 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 ADAT2Q7Z6V5 191 aaKnown RBP13.28□□□□□ -0.28
SHMT2-211ENST00000554310 PIP4P1Q86T03 277 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 PRPF39Q86UA1 669 aaKnown RBP13.28□□□□□ -0.28
SHMT2-211ENST00000554310 ZNF564Q8TBZ8 553 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-211ENST00000554310 TEKT4Q8WW24 435 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 SKA1Q96BD8 255 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 ARHGEF26Q96DR7 871 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 SLC6A18Q96N87 628 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 OSBPL1AQ9BXW6 950 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 ZDHHC6Q9H6R6 413 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHMT2-211ENST00000554310 UVRAGQ9P2Y5 699 aa13.28□□□□□ -0.28
SHMT2-211ENST00000554310 HECAQ9UBI9 543 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-211ENST00000554310 UQCRHLA0A096LP55 91 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 ARHGAP42A6NI28 874 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 MYO1FO00160 1098 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 AKR1B10O60218 316 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 PRAMEF11O60813 436 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 UQCRHP07919 91 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 H2AFZP0C0S5 128 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 ERCC2P18074 760 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 C21orf59P57076 290 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 TAS2R38P59533 333 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 RHOAP61586 193 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 SLC25A11Q02978 314 aaKnown RBP13.27□□□□□ -0.29
SHMT2-211ENST00000554310 HNRNPDQ14103 355 aaKnown RBP13.27□□□□□ -0.29
SHMT2-211ENST00000554310 SMTNL2Q2TAL5 461 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 HLA-BQ31612 363 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 SLC45A4Q5BKX6 768 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 KCNT1Q5JUK3 1230 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 AFMIDQ63HM1 303 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 LEKR1Q6ZMV7 388 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 H2AFVQ71UI9 128 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 PARS2Q7L3T8 475 aaKnown RBP13.27□□□□□ -0.29
SHMT2-211ENST00000554310 RYBPQ8N488 228 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-211ENST00000554310 DEFB124Q8NES8 71 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 SERAC1Q96JX3 654 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 KLC2Q9H0B6 622 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 GAREM1Q9H706 876 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 EBF2Q9HAK2 575 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 PDFQ9HBH1 243 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 AASDHPPTQ9NRN7 309 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 TRMT1Q9NXH9 659 aaKnown RBP13.27□□□□□ -0.29
SHMT2-211ENST00000554310 CWC15Q9P013 229 aaKnown RBP13.27□□□□□ -0.29
SHMT2-211ENST00000554310 CTTNBP2NLQ9P2B4 639 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 UBA2Q9UBT2 640 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-211ENST00000554310 ANKRD6Q9Y2G4 727 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 FNDC3AQ9Y2H6 1198 aaKnown RBP13.27□□□□□ -0.29
SHMT2-211ENST00000554310 PCNX2A6NKB5 2137 aa13.27□□□□□ -0.29
SHMT2-211ENST00000554310 KRIT1O00522 736 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
SHMT2-211ENST00000554310 POP4O95707 220 aaKnown RBP13.26□□□□□ -0.29
SHMT2-211ENST00000554310 RARAP10276 462 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 ADRB3P13945 408 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 CD59P13987 128 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 TCF4P15884 667 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 CD38P28907 300 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 CTSKP43235 329 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 RAD51Q06609 339 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 HADHQ16836 314 aaKnown RBP13.26□□□□□ -0.29
SHMT2-211ENST00000554310 MYLK3Q32MK0 819 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 ZNF805Q5CZA5 627 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms