RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 C7P10643 843 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 CYP11B1P15538 503 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 DDOSTP39656 456 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ACOT2P49753 483 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 GHRHRQ02643 423 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 BFSP1Q12934 665 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 TRIM28Q13263 835 aaKnown RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 CBX2Q14781 532 aaPredicted RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 PPP1R3AQ16821 1122 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ZNF181Q2M3W8 571 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ESCO2Q56NI9 601 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 STEAP3Q658P3 488 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ZNF544Q6NX49 715 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 LLGL2Q6P1M3 1020 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 RSBN1LQ6PCB5 846 aaPredicted RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 MFSD7Q6UXD7 560 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 VN1R5Q7Z5H4 357 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 CAMK1DQ8IU85 385 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 HID1Q8IV36 788 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ANKRD13AQ8IZ07 590 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 PDIK1LQ8N165 341 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 SYNE4Q8N205 404 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 CELF2-AS1Q8N7Q2 184 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ZBTB38Q8NAP3 1195 aaPredicted RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 TDRD5Q8NAT2 981 aaKnown RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 C7orf57Q8NEG2 295 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 OR2T34Q8NGX1 318 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 RHOXF1Q8NHV9 184 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 SLC35B2Q8TB61 432 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 CYGBQ8WWM9 190 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 CEP170P1Q96L14 293 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 RIPOR3Q96MK2 946 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 EYA3Q99504 573 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ZSCAN5AQ9BUG6 496 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ALOXE3Q9BYJ1 711 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 PCDHAC1Q9H158 963 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 SERHL2Q9H4I8 314 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 COG4Q9H9E3 785 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 SMYD2Q9NRG4 433 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ABCB10Q9NRK6 738 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 FARSBQ9NSD9 589 aaKnown RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 IL37Q9NZH6 218 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 VWA7Q9Y334 891 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ITGB4P16144 1822 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 DOT1LQ8TEK3 1739 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 KCPQ6ZWJ8 1503 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 PI4K2BG5E9Z4 385 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 INO80B-WBP1J3KQ70 363 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 RIMBP2O15034 1052 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 EPN2O95208 641 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ATF4P18848 351 aaPredicted RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 RPL22P35268 128 aaKnown RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 HTR3AP46098 478 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 GDF10P55107 478 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 CTSWP56202 376 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ABCE1P61221 599 aaKnown RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 RHAGQ02094 409 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 FSTL1Q12841 308 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 TRAP1Q12931 704 aaKnown RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 CYBRD1Q53TN4 286 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 IGSF11Q5DX21 431 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ZFYVE27Q5T4F4 411 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 C15orf52Q6ZUT6 534 aaKnown RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 SPRED1Q7Z699 444 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 GATAD2AQ86YP4 633 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 MCOLN2Q8IZK6 566 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 PSMA8Q8TAA3 256 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 SHC3Q92529 594 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 LPGAT1Q92604 370 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 MUL1Q969V5 352 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 C8orf37Q96NL8 207 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 TOR4AQ9NXH8 423 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 ZNRF3Q9ULT6 936 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 PCDHGA7Q9Y5G6 932 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 TNRC6CQ9HCJ0 1690 aaKnown RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 NRAPQ86VF7 1730 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 LEUTXA8MZ59 168 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 NRP1O14786 923 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 TRIM24O15164 1050 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 B4GAT1O43505 415 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 TADA2AO75478 443 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 OR7A10O76100 309 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 GABARAPO95166 117 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 PRKCGP05129 697 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 PRKCHP24723 683 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 PTPN7P35236 360 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 PSMC6P62333 389 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 CBLBQ13191 982 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 PPIL2Q13356 520 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 POLD3Q15054 466 aaPredicted RBP9.65□□□□□ -0.86
SIX4-202ENST00000554079 SPATC1Q76KD6 591 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 UBQLNLQ8IYU4 475 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 EID3Q8N140 333 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 SFRP1Q8N474 314 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 CCDC185Q8N715 623 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 APPL2Q8NEU8 664 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 LRRC20Q8TCA0 184 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 CCDC120Q96HB5 630 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms