RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 LENG8Q96PV6 779 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-203ENST00000554074 ERGIC2Q96RQ1 377 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 C11orf70Q9BRQ4 267 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 SELENOOQ9BVL4 669 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 OSBPL1AQ9BXW6 950 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 NRSN2Q9GZP1 204 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 TNKS2Q9H2K2 1166 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 USP29Q9HBJ7 922 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 NLRC4Q9NPP4 1024 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 ADAM22Q9P0K1 906 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 HPCAL4Q9UM19 191 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 ZFR2Q9UPR6 939 aaKnown RBP6.73□□□□□ -1.33
SLIRP-203ENST00000554074 FADS3Q9Y5Q0 445 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 SCN8AQ9UQD0 1980 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 FAM149AA5PLN7 773 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 NEMP2A6NFY4 417 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 A6NNZ2 444 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 WASH4PA8MWX3 477 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 EIF3CLB5ME19 914 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 RNF103O00237 685 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 TOR1BO14657 336 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SLC31A1O15431 190 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 KDELR3O43731 214 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 RAMP2O60895 175 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 PIAS2O75928 621 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 PCDH8O95206 1070 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 ZIC2O95409 532 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 POP4O95707 220 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 GP1BAP07359 652 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 CCDC172P0C7W6 258 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 CKMT1AP12532 417 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 JUPP14923 745 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 NME1P15531 152 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 DGKAP23743 735 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 HTR7P34969 479 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 RFC1P35251 1148 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 ACVRL1P37023 503 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 ZNF143P52747 638 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 YBEYP58557 167 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 HNRNPKP61978 463 aaKnown RBP eCLIP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SNRPD1P62314 119 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 TPM4P67936 248 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 DNAJC3Q13217 504 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 POLD3Q15054 466 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SYCP1Q15431 976 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 CDO1Q16878 200 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 ZSCAN23Q3MJ62 389 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 RAB6CQ53S08 254 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 HS1BP3Q53T59 392 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 INO80DQ53TQ3 878 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 ZNF805Q5CZA5 627 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SEL1L3Q68CR1 1132 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 RWDD4Q6NW29 188 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 Q6ZSR6 202 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 MON1BQ7L1V2 547 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 PARS2Q7L3T8 475 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 APTXQ7Z2E3 356 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SLFN11Q7Z7L1 901 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SLC22A18ASQ8N1D0 253 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SLC25A45Q8N413 288 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 CCDC185Q8N715 623 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 RTL3Q8N8U3 475 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 DCBLD1Q8N8Z6 715 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 FAM181AQ8N9Y4 354 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 DENND6BQ8NEG7 585 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 OR13H1Q8NG92 308 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 OR2AP1Q8NGE2 309 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SLC30A5Q8TAD4 765 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 FAM172AQ8WUF8 416 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 VOPP1Q96AW1 172 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 VCPIP1Q96JH7 1222 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 TBATAQ96M53 351 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 PCDHB18PQ96TA0 734 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 EIF3CQ99613 913 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 FUCA2Q9BTY2 467 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 C1QTNF2Q9BXJ5 285 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SLC17A9Q9BYT1 436 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 RAB6CQ9H0N0 254 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 NDFIP2Q9NV92 336 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 EVA1BQ9NVM1 165 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 DONSONQ9NYP3 566 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 NLGN3Q9NZ94 848 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 HECAQ9UBI9 543 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 DKK3Q9UBP4 350 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 MYO6Q9UM54 1294 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 RAXQ9Y2V3 346 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 FCF1Q9Y324 198 aaKnown RBP6.72□□□□□ -1.33
SLIRP-203ENST00000554074 MFHAS1Q9Y4C4 1052 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 CSNK1G3Q9Y6M4 447 aa6.72□□□□□ -1.33
SLIRP-203ENST00000554074 SPTY2D1-AS1A0A0U1RR47 76 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 ANKRD62A6NC57 917 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 FAM72CH0Y354 149 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 TRIM38O00635 465 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 TPP1O14773 563 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 AREL1O15033 823 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 SCAMP1O15126 338 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 FGF10O15520 208 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-203ENST00000554074 CCP110O43303 1012 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 SIGLEC6O43699 453 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 LZTS3O60299 673 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms