RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TFB1MQ8WVM0 346 aaKnown RBP14.05□□□□□ -0.16
TUBB3-202ENST00000553656 PSKH2Q96QS6 385 aa14.05□□□□□ -0.16
TUBB3-202ENST00000553656 LGMNQ99538 433 aa14.05□□□□□ -0.16
TUBB3-202ENST00000553656 ITM2CQ9NQX7 267 aa14.05□□□□□ -0.16
TUBB3-202ENST00000553656 FBXL12Q9NXK8 326 aa14.05□□□□□ -0.16
TUBB3-202ENST00000553656 USP36Q9P275 1121 aaKnown RBP14.05□□□□□ -0.16
TUBB3-202ENST00000553656 SAE1Q9UBE0 346 aaPredicted RBP14.05□□□□□ -0.16
TUBB3-202ENST00000553656 EVLQ9UI08 416 aaPredicted RBP14.05□□□□□ -0.16
TUBB3-202ENST00000553656 PPM1HQ9ULR3 514 aa14.05□□□□□ -0.16
TUBB3-202ENST00000553656 TTLL3Q9Y4R7 772 aa14.05□□□□□ -0.16
TUBB3-202ENST00000553656 A0A1W2PP55 124 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 USP27XA6NNY8 438 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 H7C0C1 242 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 MTSS1O43312 755 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 HRO43593 1189 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 LILRB5O75023 590 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 LEFTY1O75610 366 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 PEX11BO96011 259 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 CCNB1P14635 433 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 CD6P30203 668 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 ATP5OP48047 213 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 ADCY2Q08462 1091 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 ITKQ08881 620 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 NSUN2Q08J23 767 aaKnown RBP eCLIP14.04□□□□□ -0.16
TUBB3-202ENST00000553656 SRSF5Q13243 272 aaKnown RBP14.04□□□□□ -0.16
TUBB3-202ENST00000553656 ELF2Q15723 593 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 MAP7D1Q3KQU3 841 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 FAM124AQ86V42 546 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 ZC3H18Q86VM9 953 aaKnown RBP14.04□□□□□ -0.16
TUBB3-202ENST00000553656 SLC35F6Q8N357 371 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 MAML1Q92585 1016 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 TLR10Q9BXR5 811 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 BTBD1Q9H0C5 482 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 SEMA4AQ9H3S1 761 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 NT5MQ9NPB1 228 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 FAM86C1Q9NVL1 165 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 RBM22Q9NW64 420 aaKnown RBP eCLIP14.04□□□□□ -0.16
TUBB3-202ENST00000553656 SEPT10Q9P0V9 454 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 FZD4Q9ULV1 537 aa14.04□□□□□ -0.16
TUBB3-202ENST00000553656 ARIH1Q9Y4X5 557 aaPredicted RBP14.04□□□□□ -0.16
TUBB3-202ENST00000553656 IGHV1OR15-9A0A0B4J2B8 117 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 HACD1B0YJ81 288 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 KCNK1O00180 336 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 ENC1O14682 589 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 ZNF189O75820 626 aaPredicted RBP14.03□□□□□ -0.16
TUBB3-202ENST00000553656 RHOBTB1O94844 696 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 IGLV3-19P01714 112 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 UGT2B4P06133 528 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 CTSLP07711 333 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 C7P10643 843 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 SERPINA4P29622 427 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 CSNK1DP48730 415 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 SCNN1BP51168 640 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 EIF3EP60228 445 aaKnown RBP14.03□□□□□ -0.16
TUBB3-202ENST00000553656 GNG11P61952 73 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 AP1S1P61966 158 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 OTUD4Q01804 1114 aaKnown RBP14.03□□□□□ -0.16
TUBB3-202ENST00000553656 RPL6Q02878 288 aaKnown RBP14.03□□□□□ -0.16
TUBB3-202ENST00000553656 XRCC4Q13426 336 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 NOMO1Q15155 1222 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 GDPD4Q6W3E5 623 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 LPCAT2Q7L5N7 544 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 SRLQ86TD4 932 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 CDKL3Q8IVW4 592 aaPredicted RBP14.03□□□□□ -0.16
TUBB3-202ENST00000553656 FAM160A2Q8N612 972 aaPredicted RBP14.03□□□□□ -0.16
TUBB3-202ENST00000553656 TEX26Q8N6G2 289 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 ACTL9Q8TC94 416 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 LRRN4Q8WUT4 740 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 TOE1Q96GM8 510 aaKnown RBP14.03□□□□□ -0.16
TUBB3-202ENST00000553656 TUBGCP5Q96RT8 1024 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 MGME1Q9BQP7 344 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 POLR1EQ9GZS1 481 aaKnown RBP14.03□□□□□ -0.16
TUBB3-202ENST00000553656 ATP13A3Q9H7F0 1226 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 SGK2Q9HBY8 427 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 AMACRQ9UHK6 382 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 SARDHQ9UL12 918 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 WASF2Q9Y6W5 498 aa14.03□□□□□ -0.16
TUBB3-202ENST00000553656 SHROOM3Q8TF72 1996 aa14.02□□□□□ -0.16
TUBB3-202ENST00000553656 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.02□□□□□ -0.17
TUBB3-202ENST00000553656 SLC7A4O43246 635 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 CEP104O60308 925 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 STK10O94804 968 aaKnown RBP14.02□□□□□ -0.17
TUBB3-202ENST00000553656 JCHAINP01591 159 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 ITGB7P26010 798 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 GKP32189 559 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 RGRP47804 291 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 NEK3P51956 506 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 MAXP61244 160 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 IFI35P80217 286 aaPredicted RBP14.02□□□□□ -0.17
TUBB3-202ENST00000553656 BCL2L1Q07817 233 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 PRKD1Q15139 912 aaPredicted RBP14.02□□□□□ -0.17
TUBB3-202ENST00000553656 SLC45A4Q5BKX6 768 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 ZNF805Q5CZA5 627 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 RALGPS1Q5JS13 557 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 FBXL19Q6PCT2 694 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.02□□□□□ -0.17
TUBB3-202ENST00000553656 SLC13A5Q86YT5 568 aaPredicted RBP14.02□□□□□ -0.17
TUBB3-202ENST00000553656 AADATQ8N5Z0 425 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 MAIP1Q8WWC4 291 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms