RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ANTXRLA6NF34 631 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 C19orf67A6NJJ6 358 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 STK25O00506 426 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 DNALI1O14645 258 aaPredicted RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 ANXA9O76027 345 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 MT-CYBP00156 380 aaPredicted RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 GLULP15104 373 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 DRD1P21728 446 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 TNFRSF4P43489 277 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 GEMP55040 296 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 PLTPP55058 493 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 SNRPD1P62314 119 aaKnown RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 NIPAL4Q0D2K0 466 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 PTPRNQ16849 979 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 DGKKQ5KSL6 1271 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 DUPD1Q68J44 220 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 FSTL4Q6MZW2 842 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 PPP1R21Q6ZMI0 780 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 PCGF5Q86SE9 256 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 SRLQ86TD4 932 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 PPIL6Q8IXY8 311 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 GSPT2Q8IYD1 628 aaKnown RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 CHPFQ8IZ52 775 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 GJD3Q8N144 294 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 PCDH20Q8N6Y1 951 aaKnown RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 PDCD7Q8N8D1 485 aaKnown RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 PDCD6IPQ8WUM4 868 aaKnown RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 MSANTD3Q96H12 275 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 MRGPRX3Q96LB0 322 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 PSKH2Q96QS6 385 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 APOL2Q9BQE5 337 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 FICDQ9BVA6 458 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 FSD1LQ9BXM9 530 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 CEP44Q9C0F1 390 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 SLC25A51Q9H1U9 297 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 ZDHHC6Q9H6R6 413 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 ANKZF1Q9H8Y5 726 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 NOD2Q9HC29 1040 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 ARHGEF3Q9NR81 526 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 CACNA2D2Q9NY47 1150 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 WHRNQ9P202 907 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 HECAQ9UBI9 543 aaPredicted RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 EVLQ9UI08 416 aaPredicted RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 MUTYHQ9UIF7 546 aa9.9□□□□□ -0.82
CHD8-204ENST00000553622 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
CHD8-204ENST00000553622 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 UQCRHLA0A096LP55 91 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 K7EQS6 105 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 MAN2B1O00754 1011 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 NDC80O14777 642 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 INSIG1O15503 277 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 PSMD3O43242 534 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 ATP9BO43861 1147 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 USP12O75317 370 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 SEC31AO94979 1220 aaKnown RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 KLF8O95600 359 aaPredicted RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 EPHX1P07099 455 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 UQCRHP07919 91 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 SERPINF2P08697 491 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 ITIH2P19823 946 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 PRKCHP24723 683 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 GKP32189 559 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 CCNHP51946 323 aaPredicted RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 RAD51Q06609 339 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 MTM1Q13496 603 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 CUL1Q13616 776 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 UBXN2BQ14CS0 331 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 E2F5Q15329 346 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 CARD16Q5EG05 197 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 TMEM196Q5HYL7 178 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 CFAP58Q5T655 872 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 RNASEH2BQ5TBB1 312 aaKnown RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 ANKRD22Q5VYY1 191 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 SDE2Q6IQ49 451 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 ZNF852Q6ZMS4 543 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 CCDC25Q86WR0 208 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 SIX5Q8N196 739 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 SLC25A41Q8N5S1 370 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 GPR161Q8N6U8 529 aaKnown RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 OR2AP1Q8NGE2 309 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 GRIN3AQ8TCU5 1115 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 CPT1BQ92523 772 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 IFT43Q96FT9 208 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 IMP4Q96G21 291 aaKnown RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 OXNAD1Q96HP4 312 aaPredicted RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 PPP1R2P1Q96PQ5 205 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 FCRL5Q96RD9 977 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 NUDCD1Q96RS6 583 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 ACOX2Q99424 681 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 MLPHQ9BV36 600 aaPredicted RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 THAP10Q9P2Z0 257 aaPredicted RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 FAM153AQ9UHL3 310 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 NFU1Q9UMS0 254 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 AAR2Q9Y312 384 aaKnown RBP9.89□□□□□ -0.83
CHD8-204ENST00000553622 STON1Q9Y6Q2 735 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 LRRK1Q38SD2 2015 aa9.89□□□□□ -0.83
CHD8-204ENST00000553622 EDDM13A0A1B0GTR0 161 aa9.88□□□□□ -0.83
CHD8-204ENST00000553622 CXorf51AA0A1B0GTR3 108 aa9.88□□□□□ -0.83
CHD8-204ENST00000553622 TCRBV7S3A2A0A539 114 aa9.88□□□□□ -0.83
CHD8-204ENST00000553622 WASH3PC4AMC7 463 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms