RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ANKRD62A6NC57 917 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 FLRT2O43155 660 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 LRCH4O75427 683 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 PIGNO95427 931 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 PRKCGP05129 697 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 RECQLP46063 649 aaPredicted RBP18.52■□□□□ 0.56
SHMT2-206ENST00000553529 ZNF542PQ5EBM4 170 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 HORMAD1Q86X24 394 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 OR13H1Q8NG92 308 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 SAP25Q8TEE9 199 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 KLHL32Q96NJ5 620 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.52■□□□□ 0.56
SHMT2-206ENST00000553529 XPO4Q9C0E2 1151 aaKnown RBP18.52■□□□□ 0.56
SHMT2-206ENST00000553529 PDFQ9HBH1 243 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 PREBQ9HCU5 417 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 A0A087X0T9 212 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 TTC24A2A3L6 582 aaPredicted RBP18.51■□□□□ 0.55
SHMT2-206ENST00000553529 CCDC172P0C7W6 258 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 FAM228BP0C875 321 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 MYF5P13349 255 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 ITGB7P26010 798 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 EPHA8P29322 1005 aaPredicted RBP18.51■□□□□ 0.55
SHMT2-206ENST00000553529 ETFBP38117 255 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 NEK3P51956 506 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 SFSWAPQ12872 951 aaKnown RBP18.51■□□□□ 0.55
SHMT2-206ENST00000553529 SERINC3Q13530 473 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 TMEM259Q4ZIN3 620 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 PPP6R3Q5H9R7 873 aaPredicted RBP18.51■□□□□ 0.55
SHMT2-206ENST00000553529 FAM182AQ5T1J6 154 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 ACBD5Q5T8D3 534 aaPredicted RBP18.51■□□□□ 0.55
SHMT2-206ENST00000553529 KANSL1Q7Z3B3 1105 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 ARHGAP12Q8IWW6 846 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 EID2Q8N6I1 236 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 OR2AP1Q8NGE2 309 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 CCDC114Q96M63 670 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 EPAS1Q99814 870 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 HDAC8Q9BY41 377 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 ISCUQ9H1K1 167 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 LRRC19Q9H756 370 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 DYRK4Q9NR20 520 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 GDF3Q9NR23 364 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 ETNK2Q9NVF9 386 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 UCKL1Q9NWZ5 548 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 FARP1Q9Y4F1 1045 aaPredicted RBP18.51■□□□□ 0.55
SHMT2-206ENST00000553529 PCDHGB2Q9Y5G2 931 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 ZFHX4Q86UP3 3567 aa18.51■□□□□ 0.55
SHMT2-206ENST00000553529 POM121BA6NF01 834 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 C16orf96A6NNT2 1141 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 WASH4PA8MWX3 477 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 EEF2KO00418 725 aaKnown RBP18.5■□□□□ 0.55
SHMT2-206ENST00000553529 PCDHGA12O60330 932 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 PAK4O96013 591 aaPredicted RBP18.5■□□□□ 0.55
SHMT2-206ENST00000553529 CASP14P31944 242 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 PAPOLAP51003 745 aaKnown RBP18.5■□□□□ 0.55
SHMT2-206ENST00000553529 MYLK3Q32MK0 819 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 SETMARQ53H47 684 aaPredicted RBP18.5■□□□□ 0.55
SHMT2-206ENST00000553529 FBXL19Q6PCT2 694 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 ZSWIM9Q86XI8 627 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 RNF214Q8ND24 703 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 VCPIP1Q96JH7 1222 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 PACSIN1Q9BY11 444 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 KDM4CQ9H3R0 1056 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 ZWILCHQ9H900 591 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 CWC15Q9P013 229 aaKnown RBP18.5■□□□□ 0.55
SHMT2-206ENST00000553529 ACACBO00763 2458 aa18.5■□□□□ 0.55
SHMT2-206ENST00000553529 IGLON5A6NGN9 336 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 MUSKO15146 869 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 GSRP00390 522 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 THEGLP0DJG4 465 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 GZMAP12544 262 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 ERCC2P18074 760 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 RHOAP61586 193 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 SLC20A2Q08357 652 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 STAT4Q14765 748 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 FIGNQ5HY92 759 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 ERMARDQ5T6L9 678 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 RFX8Q6ZV50 586 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 GLRX5Q86SX6 157 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 UMODL1-AS1Q8N2C9 162 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 MFSD2AQ8NA29 543 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 ADAMTS14Q8WXS8 1223 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 HSPH1Q92598 858 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 BMFQ96LC9 184 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 CALN1Q9BXU9 219 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 PNMA8BQ9ULN7 279 aaPredicted RBP18.49■□□□□ 0.55
SHMT2-206ENST00000553529 TPRP12270 2363 aaKnown RBP18.49■□□□□ 0.55
SHMT2-206ENST00000553529 LRRK1Q38SD2 2015 aa18.49■□□□□ 0.55
SHMT2-206ENST00000553529 KMT2BQ9UMN6 2715 aaPredicted RBP18.48■□□□□ 0.55
SHMT2-206ENST00000553529 CABIN1Q9Y6J0 2220 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 A0A1W2PQJ5 194 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 PRAMEF26H0Y7S4 382 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 BUB1BO60566 1050 aaPredicted RBP18.48■□□□□ 0.55
SHMT2-206ENST00000553529 ITGAVP06756 1048 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 AMPD1P23109 780 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 GRK6P43250 576 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 ZNF805Q5CZA5 627 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 DHRS13Q6UX07 377 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 LRRN4Q8WUT4 740 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 ISG20Q96AZ6 181 aaKnown RBP18.48■□□□□ 0.55
SHMT2-206ENST00000553529 KLF6Q99612 283 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms