RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 OR14C36Q8NHC7 312 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 BIRC7Q96CA5 298 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 SMOC1Q9H4F8 434 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 CAPN10Q9HC96 672 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 PREBQ9HCU5 417 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 KLHL11Q9NVR0 708 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 TFR2Q9UP52 801 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 ALG6Q9Y672 507 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.74■□□□□ 0.59
CPSF2-202ENST00000553427 RALGAPA1Q6GYQ0 2036 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 ATXN2Q99700 1313 aaKnown RBP18.74■□□□□ 0.59
CPSF2-202ENST00000553427 SPTBN4Q9H254 2564 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 LNP1A1A4G5 178 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 C3orf70A6NLC5 250 aaPredicted RBP18.73■□□□□ 0.59
CPSF2-202ENST00000553427 LATO43561 262 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 SDHBP21912 280 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 CD27P26842 260 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 NUDT1P36639 197 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 RAD51Q06609 339 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 GALNT2Q10471 571 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 GRM3Q14832 879 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 TRIM61Q5EBN2 209 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 ATXN7L2Q5T6C5 722 aaPredicted RBP18.73■□□□□ 0.59
CPSF2-202ENST00000553427 TCEAL6Q6IPX3 200 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 NEK5Q6P3R8 708 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 ARHGAP36Q6ZRI8 547 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 TRIM69Q86WT6 500 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 TP53INP2Q8IXH6 220 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 PQLC3Q8N755 202 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 ACRBPQ8NEB7 543 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 TPCN2Q8NHX9 752 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 NETO1Q8TDF5 533 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 TCEAL3Q969E4 200 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 FATE1Q969F0 183 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 ORAI3Q9BRQ5 295 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 NUSAP1Q9BXS6 441 aaKnown RBP18.73■□□□□ 0.59
CPSF2-202ENST00000553427 CPEB1Q9BZB8 566 aaKnown RBP18.73■□□□□ 0.59
CPSF2-202ENST00000553427 ZDHHC6Q9H6R6 413 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 SALL4Q9UJQ4 1053 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 SLC6A14Q9UN76 642 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 CACNA1EQ15878 2313 aa18.73■□□□□ 0.59
CPSF2-202ENST00000553427 A0A1B0GTW7 788 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 LRRD1A4D1F6 860 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 PATE3B3GLJ2 98 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 RNF103O00237 685 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 PLK4O00444 970 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 MFSD11O43934 449 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 MAFKO60675 156 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 PALMO75781 387 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 PEX11BO96011 259 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 HSPA9P38646 679 aaKnown RBP18.72■□□□□ 0.59
CPSF2-202ENST00000553427 NEK3P51956 506 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 TAS2R38P59533 333 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 NSUN2Q08J23 767 aaKnown RBP eCLIP18.72■□□□□ 0.59
CPSF2-202ENST00000553427 TAZQ16635 292 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 POM121L1PQ3SYA9 428 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 AASDHQ4L235 1098 aaPredicted RBP18.72■□□□□ 0.59
CPSF2-202ENST00000553427 ZNF805Q5CZA5 627 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 RYBPQ8N488 228 aaPredicted RBP18.72■□□□□ 0.59
CPSF2-202ENST00000553427 NETO2Q8NC67 525 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 CCDC112Q8NEF3 446 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 OR6K2Q8NGY2 324 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 RAB7BQ96AH8 199 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 RNF157Q96PX1 679 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 PSKH2Q96QS6 385 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 LACRTQ9GZZ8 138 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 DKK3Q9UBP4 350 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 SEPT3Q9UH03 358 aa18.72■□□□□ 0.59
CPSF2-202ENST00000553427 EIF2B4Q9UI10 523 aaKnown RBP18.72■□□□□ 0.59
CPSF2-202ENST00000553427 A0A1W2PPC4 97 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 KRIT1O00522 736 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 BCAT2O15382 392 aaPredicted RBP18.71■□□□□ 0.59
CPSF2-202ENST00000553427 AP1G1O43747 822 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 FSBPO95073 299 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 KRT1P04264 644 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 MAPK8P45983 427 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 RENBPP51606 427 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 LBRQ14739 615 aaKnown RBP18.71■□□□□ 0.59
CPSF2-202ENST00000553427 ZFYVE27Q5T4F4 411 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 SLC9A4Q6AI14 798 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 PARS2Q7L3T8 475 aaKnown RBP18.71■□□□□ 0.59
CPSF2-202ENST00000553427 KIAA1328Q86T90 577 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 ZSCAN30Q86W11 494 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 ZCCHC9Q8N567 271 aaKnown RBP18.71■□□□□ 0.59
CPSF2-202ENST00000553427 HCAR2Q8TDS4 363 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 TSGA13Q96PP4 275 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 TUBGCP5Q96RT8 1024 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 CINPQ9BW66 212 aaPredicted RBP18.71■□□□□ 0.59
CPSF2-202ENST00000553427 HYOU1Q9Y4L1 999 aa18.71■□□□□ 0.59
CPSF2-202ENST00000553427 PCDH15Q96QU1 1955 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 TSPAN11A1L157 253 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 FAM47DPA6NHR8 397 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 CFIP05156 583 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 UGT2B4P06133 528 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 ADRB3P13945 408 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 MX2P20592 715 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 MAOBP27338 520 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 GKP32189 559 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 GARSP41250 739 aaKnown RBP18.7■□□□□ 0.58
CPSF2-202ENST00000553427 PPP2CBP62714 309 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms