RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SLC8A2Q9UPR5 921 aa15.06■□□□□ 0
MTHFD1-204ENST00000553405 SAR1BQ9Y6B6 198 aa15.06■□□□□ 0
MTHFD1-204ENST00000553405 TTC24A2A3L6 582 aaPredicted RBP15.05■□□□□ -0
MTHFD1-204ENST00000553405 PGRMC1O00264 195 aaKnown RBP15.05■□□□□ -0
MTHFD1-204ENST00000553405 SYNCRIPO60506 623 aaKnown RBP15.05■□□□□ -0
MTHFD1-204ENST00000553405 IGLV3-19P01714 112 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 MMP2P08253 660 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 CHRNA3P32297 505 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 HSPA9P38646 679 aaKnown RBP15.05■□□□□ -0
MTHFD1-204ENST00000553405 NIPAL4Q0D2K0 466 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 CCNG2Q16589 344 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 CYP1B1Q16678 543 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 CCDC181Q5TID7 509 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 ANO7Q6IWH7 933 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 TMPRSS6Q8IU80 811 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 C12orf50Q8NA57 414 aaPredicted RBP15.05■□□□□ -0
MTHFD1-204ENST00000553405 TMIEQ8NEW7 156 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 OR6K2Q8NGY2 324 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 C1orf54Q8WWF1 131 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 HTR3CQ8WXA8 447 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 TEKT5Q96M29 485 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 GDAP1L1Q96MZ0 367 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 CINPQ9BW66 212 aaPredicted RBP15.05■□□□□ -0
MTHFD1-204ENST00000553405 CEP41Q9BYV8 373 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 POLMQ9NP87 494 aaPredicted RBP15.05■□□□□ -0
MTHFD1-204ENST00000553405 NT5MQ9NPB1 228 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 CD93Q9NPY3 652 aa15.05■□□□□ -0
MTHFD1-204ENST00000553405 RBM22Q9NW64 420 aaKnown RBP eCLIP15.05■□□□□ -0
MTHFD1-204ENST00000553405 EVLQ9UI08 416 aaPredicted RBP15.05■□□□□ -0
MTHFD1-204ENST00000553405 FANCMQ8IYD8 2048 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 CCDC163A0A0D9SF12 145 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 H7C0C1 242 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 LAMTOR5O43504 91 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 IGSF6O95976 241 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 DRD3P35462 400 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 ATP5OP48047 213 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 PXNP49023 591 aaPredicted RBP15.04■□□□□ -0
MTHFD1-204ENST00000553405 GDF10P55107 478 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 MAXP61244 160 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 SNRPD1P62314 119 aaKnown RBP15.04■□□□□ -0
MTHFD1-204ENST00000553405 ZNF235Q14590 738 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 CST6Q15828 149 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 LONRF2Q1L5Z9 754 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 ZNF528Q3MIS6 628 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 TEX44Q53QW1 395 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 TTC27Q6P3X3 843 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 NCEH1Q6PIU2 408 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 SRLQ86TD4 932 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 MMAAQ8IVH4 418 aaKnown RBP15.04■□□□□ -0
MTHFD1-204ENST00000553405 CDKL3Q8IVW4 592 aaPredicted RBP15.04■□□□□ -0
MTHFD1-204ENST00000553405 ZNF567Q8N184 647 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 AADATQ8N5Z0 425 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 HMGB4Q8WW32 186 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 OR8D1Q8WZ84 308 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 SPOCK2Q92563 424 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 NUDCD1Q96RS6 583 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 GORASP1Q9BQQ3 440 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 HEPHQ9BQS7 1158 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 CPEB1Q9BZB8 566 aaKnown RBP15.04■□□□□ -0
MTHFD1-204ENST00000553405 NOD2Q9HC29 1040 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 USP36Q9P275 1121 aaKnown RBP15.04■□□□□ -0
MTHFD1-204ENST00000553405 SERGEFQ9UGK8 458 aa15.04■□□□□ -0
MTHFD1-204ENST00000553405 TSPAN11A1L157 253 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 TRAFD1O14545 582 aaPredicted RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 ZBTB24O43167 697 aaPredicted RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 MTSS1O43312 755 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 LEFTY1O75610 366 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 POP4O95707 220 aaKnown RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 ITGAVP06756 1048 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 DEKP35659 375 aaKnown RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 AP1S1P61966 158 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 ZBTB16Q05516 673 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 BYSLQ13895 437 aaKnown RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 ANGPT1Q15389 498 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 MAP7D1Q3KQU3 841 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 ARSIQ5FYB1 569 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 RALGPS1Q5JS13 557 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 ZNF776Q68DI1 518 aaPredicted RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 HEATR6Q6AI08 1181 aaKnown RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 PRPF39Q86UA1 669 aaKnown RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 ZSWIM9Q86XI8 627 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 KLHDC8BQ8IXV7 354 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 PIP4K2CQ8TBX8 421 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 GRIN3AQ8TCU5 1115 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 MAIP1Q8WWC4 291 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 ARRDC3Q96B67 414 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 ECHDC3Q96DC8 303 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 LRIG1Q96JA1 1093 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 TMEM121Q9BTD3 319 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 PABPC3Q9H361 631 aaKnown RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 IL36AQ9UHA7 158 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 DRG1Q9Y295 367 aaKnown RBP15.03■□□□□ -0
MTHFD1-204ENST00000553405 ANKRD36A6QL64 1941 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 WDR87Q6ZQQ6 2873 aa15.03■□□□□ -0
MTHFD1-204ENST00000553405 NUMA1Q14980 2115 aa15.02■□□□□ -0
MTHFD1-204ENST00000553405 C5orf60A6NFR6 353 aa15.02■□□□□ -0
MTHFD1-204ENST00000553405 MID1O15344 667 aa15.02■□□□□ -0
MTHFD1-204ENST00000553405 SPINT1O43278 529 aa15.02■□□□□ -0
MTHFD1-204ENST00000553405 HTRA2O43464 458 aaPredicted RBP15.02■□□□□ -0
MTHFD1-204ENST00000553405 BNIP3LO60238 219 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms