RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 C21orf59P57076 290 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 RHOAP61586 193 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 SLC25A11Q02978 314 aaKnown RBP15.58■□□□□ 0.08
SHMT2-204ENST00000553324 HNRNPDQ14103 355 aaKnown RBP15.58■□□□□ 0.08
SHMT2-204ENST00000553324 KRT81Q14533 505 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 SETMARQ53H47 684 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-204ENST00000553324 ZNF805Q5CZA5 627 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 PPM1JQ5JR12 505 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 TMCO3Q6UWJ1 677 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 LRRC49Q8IUZ0 686 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 CCDC170Q8IYT3 715 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 SLC35G2Q8TBE7 412 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 ARRDC3Q96B67 414 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 CELF6Q96J87 481 aaKnown RBP15.58■□□□□ 0.08
SHMT2-204ENST00000553324 FEM1CQ96JP0 617 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 SERAC1Q96JX3 654 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 CSPG4P5Q96PW8 444 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 ORAI3Q9BRQ5 295 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 PACSIN1Q9BY11 444 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 CPEB1Q9BZB8 566 aaKnown RBP15.58■□□□□ 0.08
SHMT2-204ENST00000553324 KLC2Q9H0B6 622 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 ZDHHC6Q9H6R6 413 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 FSCN3Q9NQT6 498 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 ANKRD6Q9Y2G4 727 aa15.58■□□□□ 0.08
SHMT2-204ENST00000553324 A0A1B0GVT2 93 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 PRAMEF26H0Y7S4 382 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 DFFAO00273 331 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 PLK4O00444 970 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 AP1G1O43747 822 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 PALMO75781 387 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 ZNF883P0CG24 379 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 CD38P28907 300 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 ZNF75DP51815 510 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 CDH6P55285 790 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 IL10RBQ08334 325 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 NSUN2Q08J23 767 aaKnown RBP eCLIP15.57■□□□□ 0.08
SHMT2-204ENST00000553324 OVGP1Q12889 678 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 STAT4Q14765 748 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 SUZ12Q15022 739 aaKnown RBP15.57■□□□□ 0.08
SHMT2-204ENST00000553324 PDK2Q15119 407 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 CYTH1Q15438 398 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 GDPD4Q6W3E5 623 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 LEKR1Q6ZMV7 388 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 IQCHQ86VS3 1027 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 TC2NQ8N9U0 490 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 KCTD6Q8NC69 237 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 HCAR2Q8TDS4 363 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 ZNF599Q96NL3 588 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 GAREM1Q9H706 876 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 SP110Q9HB58 689 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 PDFQ9HBH1 243 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 PCDH18Q9HCL0 1135 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 LUC7LQ9NQ29 371 aaKnown RBP15.57■□□□□ 0.08
SHMT2-204ENST00000553324 AASDHPPTQ9NRN7 309 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 SPTLC3Q9NUV7 552 aa15.57■□□□□ 0.08
SHMT2-204ENST00000553324 C16orf96A6NNT2 1141 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 J3KR12 359 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 TSPAN6O43657 245 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 PCDH8O95206 1070 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 KCNK5O95279 499 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 ADRB3P13945 408 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 TCF4P15884 667 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 AMPD1P23109 780 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 CSNK1DP48730 415 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 RENBPP51606 427 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 SUOXP51687 545 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 TAS2R38P59533 333 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 RPS21P63220 83 aaKnown RBP15.56■□□□□ 0.08
SHMT2-204ENST00000553324 TCEAL1Q15170 157 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 KIF19Q2TAC6 998 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 HLA-BQ31612 363 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 NAPEPLDQ6IQ20 393 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 HORMAD1Q86X24 394 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 ARHGAP12Q8IWW6 846 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 MFSD2AQ8NA29 543 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 FAM174AQ8TBP5 190 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 FAM71BQ8TC56 605 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 NSMCE1Q8WV22 266 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 EBF2Q9HAK2 575 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 DKK3Q9UBP4 350 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 IPO11Q9UI26 975 aaKnown RBP15.56■□□□□ 0.08
SHMT2-204ENST00000553324 PCDHGB2Q9Y5G2 931 aa15.56■□□□□ 0.08
SHMT2-204ENST00000553324 PI4KAP42356 2102 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 CEP192Q8TEP8 1941 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 TNRC6BQ9UPQ9 1833 aaKnown RBP15.55■□□□□ 0.08
SHMT2-204ENST00000553324 A0A1W2PQU0 124 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 GJB3O75712 270 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 MTA2O94776 668 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 UGT2B4P06133 528 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 MAT2AP31153 395 aaKnown RBP15.55■□□□□ 0.08
SHMT2-204ENST00000553324 CYLC1P35663 651 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-204ENST00000553324 SLC1A1P43005 524 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 NOVA1P51513 510 aaKnown RBP15.55■□□□□ 0.08
SHMT2-204ENST00000553324 PPP2CBP62714 309 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 PPP2CAP67775 309 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 MESDQ14696 234 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 SPA17Q15506 151 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 ATXN7L2Q5T6C5 722 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-204ENST00000553324 TXNRD3NBQ6F5E7 133 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 KIAA1161Q6NSJ0 714 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms