RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	IKBKG	Q9Y6K9	419 aa		12.87	□□□□□ -0.35
CACNB3-223	ENST00000552480		A6NNZ2	444 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	ATP9B	O43861	1147 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	SNAP91	O60641	907 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	PENK	P01210	267 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	INHBA	P08476	426 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	SERPINF2	P08697	491 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	TPH1	P17752	444 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	RGS19	P49795	217 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	SLC12A1	Q13621	1099 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	PCSK7	Q16549	785 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	TUBB8	Q3ZCM7	444 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	ANKRD20A4	Q4UJ75	823 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	INO80D	Q53TQ3	878 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	TRMT10B	Q6PF06	316 aa	Known RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	TMC5	Q6UXY8	1006 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	MARK2	Q7KZI7	788 aa	Known RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	ARID3B	Q8IVW6	561 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	CTAGE3P	Q8IX95	158 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	PPM1N	Q8N819	430 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	ZNF557	Q8N988	423 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	PPHLN1	Q8NEY8	458 aa	Known RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	CDKL2	Q92772	493 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	ZNF669	Q96BR6	464 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	FEM1C	Q96JP0	617 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	KIFC1	Q9BW19	673 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	SMYD2	Q9NRG4	433 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	VPS51	Q9UID3	782 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	ACTL7A	Q9Y615	435 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	RPS6KL1	Q9Y6S9	549 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	FAM169A	Q9Y6X4	670 aa		12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	MKI67	P46013	3256 aa	Known RBP	12.86	□□□□□ -0.35
CACNB3-223	ENST00000552480	MYO18A	Q92614	2054 aa	Known RBP	12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	IQANK1	A0A1B0GTG1	560 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	CXorf51A	A0A1B0GTR3	108 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	ZCWPW2	A0A1B0GU75	182 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	LOC285095	A0A1B0GVY8	99 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	CXorf49	A8MYA2	514 aa	Predicted RBP	12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	SLC9A3R1	O14745	358 aa	Predicted RBP	12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	SHOX2	O60902	331 aa	Predicted RBP	12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	TMCC1	O94876	653 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	CD160	O95971	181 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	KRT15	P19012	456 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	CR2	P20023	1033 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	NUMB	P49757	651 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	PLK1	P53350	603 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	MGAT5	Q09328	741 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	LMAN2	Q12907	356 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	IHH	Q14623	411 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	TERF2	Q15554	542 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	SLC1A5	Q15758	541 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	RARS2	Q5T160	578 aa	Known RBP	12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	PKN3	Q6P5Z2	889 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	TMEM184A	Q6ZMB5	413 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	RASSF3	Q86WH2	238 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	SRRM1	Q8IYB3	904 aa	Known RBP	12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	TDH	Q8IZJ6	230 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	APCDD1	Q8J025	514 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	CNPY4	Q8N129	248 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	SLC25A41	Q8N5S1	370 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	CELF5	Q8N6W0	485 aa	Known RBP	12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	MZB1	Q8WU39	189 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	BHMT	Q93088	406 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	ACD	Q96AP0	544 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	TIFA	Q96CG3	184 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	CERS2	Q96G23	380 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	LMLN	Q96KR4	655 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	FCRL3	Q96P31	734 aa	Predicted RBP	12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	NUDCD1	Q96RS6	583 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	RANBP9	Q96S59	729 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	SELENOS	Q9BQE4	189 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	CAPS2	Q9BXY5	557 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	NSUN3	Q9H649	340 aa	Known RBP	12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	SCUBE2	Q9NQ36	999 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	SPHK2	Q9NRA0	654 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	PLK2	Q9NYY3	685 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	LHX3	Q9UBR4	397 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	TCAF1	Q9Y4C2	921 aa		12.85	□□□□□ -0.35
CACNB3-223	ENST00000552480	TTC24	A2A3L6	582 aa	Predicted RBP	12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	RFXAP	O00287	272 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	INSIG1	O15503	277 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	PIAS1	O75925	651 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	SLC34A2	O95436	690 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	EPO	P01588	193 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	FGF1	P05230	155 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	ATXN1L	P0C7T5	689 aa	Known RBP	12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	HLA-DPA1	P20036	260 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	FSHR	P23945	695 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	ADRA1D	P25100	572 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	CD70	P32970	193 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	MDH1	P40925	334 aa	Known RBP	12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	CHRNA4	P43681	627 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	RGR	P47804	291 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	SERPINB9	P50453	376 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	SERPINH1	P50454	418 aa	Known RBP	12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	CDK18	Q07002	472 aa		12.84	□□□□□ -0.35
CACNB3-223	ENST00000552480	POU6F1	Q14863	301 aa		12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms