RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 TBL1YQ9BQ87 522 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 CYLDQ9NQC7 956 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 SPHK2Q9NRA0 654 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 PKP3Q9Y446 797 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 RAI2Q9Y5P3 530 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 RBBP6Q7Z6E9 1792 aaKnown RBP8.28□□□□□ -1.08
CHPT1-208ENST00000552215 MGAMO43451 1857 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3DA0A087WVF3 549 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3IA0A087WXS9 549 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3EA0A087X179 549 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3KA0A087X1G2 549 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3FA6NER0 549 aaPredicted RBP8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3LB9A6J9 549 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 NDUFS3O75489 264 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 NFATC1O95644 943 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3HP0C7X1 549 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 CDH4P55283 916 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 IFI35P80217 286 aaPredicted RBP8.28□□□□□ -1.08
CHPT1-208ENST00000552215 USP10Q14694 798 aaKnown RBP8.28□□□□□ -1.08
CHPT1-208ENST00000552215 STARD3Q14849 445 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3GQ6DHY5 549 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3CQ6IPX1 549 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 C16orf46Q6P387 395 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 ZNF662Q6ZS27 426 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 SFTPA1Q8IWL2 248 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D3Q8IZP1 549 aaPredicted RBP8.28□□□□□ -1.08
CHPT1-208ENST00000552215 LZTR1Q8N653 840 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 FGF14Q92915 247 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 RNF31Q96EP0 1072 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 SLC6A17Q9H1V8 727 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 FBXO6Q9NRD1 293 aaPredicted RBP8.28□□□□□ -1.08
CHPT1-208ENST00000552215 LATS2Q9NRM7 1088 aa8.28□□□□□ -1.08
CHPT1-208ENST00000552215 USP15Q9Y4E8 981 aaPredicted RBP8.28□□□□□ -1.08
CHPT1-208ENST00000552215 PHGDHO43175 533 aaKnown RBP8.27□□□□□ -1.08
CHPT1-208ENST00000552215 GPR39O43194 453 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 SASH3O75995 380 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 IGSF6O95976 241 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 POLBP06746 335 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 TUBBP07437 444 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 ZXDBP98169 803 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 SLC12A1Q13621 1099 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 KBTBD12Q3ZCT8 623 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 MSS51Q4VC12 460 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 PRAMEF14Q5SWL7 426 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 RNF187Q5TA31 235 aaPredicted RBP8.27□□□□□ -1.08
CHPT1-208ENST00000552215 LGSNQ5TDP6 509 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 OTUD1Q5VV17 481 aaPredicted RBP8.27□□□□□ -1.08
CHPT1-208ENST00000552215 TRMT10BQ6PF06 316 aaKnown RBP8.27□□□□□ -1.08
CHPT1-208ENST00000552215 PSTKQ8IV42 348 aaKnown RBP8.27□□□□□ -1.08
CHPT1-208ENST00000552215 RASGEF1CQ8N431 466 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 OR14C36Q8NHC7 312 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 HDAC10Q969S8 669 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 PLD4Q96BZ4 506 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 SERPINB12Q96P63 405 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 SMC6Q96SB8 1091 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 ACOX2Q99424 681 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 GDF15Q99988 308 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 FEM1AQ9BSK4 669 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 PNPLA8Q9NP80 782 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 TBC1D14Q9P2M4 693 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 ARL5AQ9Y689 179 aa8.27□□□□□ -1.08
CHPT1-208ENST00000552215 TRIM49D1C9J1S8 452 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 UGT1A9O60656 530 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 OPHN1O60890 802 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 BRAFP15056 766 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 LPAL2Q16609 132 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 BEND6Q5SZJ8 279 aaPredicted RBP8.27□□□□□ -1.09
CHPT1-208ENST00000552215 STRA8Q7Z7C7 330 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 PPP4R1Q8TF05 950 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 ZNF778Q96MU6 729 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 NUDCD1Q96RS6 583 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 OXCT2Q9BYC2 517 aaPredicted RBP8.27□□□□□ -1.09
CHPT1-208ENST00000552215 CAB39LQ9H9S4 337 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 UGT1A7Q9HAW7 530 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 UGT1A10Q9HAW8 530 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 UGT1A8Q9HAW9 530 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 GGA2Q9UJY4 613 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 COQ6Q9Y2Z9 468 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 AAR2Q9Y312 384 aaKnown RBP8.27□□□□□ -1.09
CHPT1-208ENST00000552215 PDHA1P08559 390 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 UGT1A6P19224 532 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 UGT1A1P22309 533 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 UGT1A4P22310 534 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 UGT1A3P35503 534 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 UGT1A5P35504 534 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 CDK18Q07002 472 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 ADGRE1Q14246 886 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 KRT33BQ14525 404 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 CHST14Q8NCH0 376 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 OR4K2Q8NGD2 314 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 RLN3Q8WXF3 142 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 TBATAQ96M53 351 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 TPSD1Q9BZJ3 242 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 ARHGEF38Q9NXL2 777 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 NINJ2Q9NZG7 142 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 FNIP2Q9P278 1114 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 MARCOQ9UEW3 520 aaPredicted RBP8.27□□□□□ -1.09
CHPT1-208ENST00000552215 SLC2A6Q9UGQ3 507 aa8.27□□□□□ -1.09
CHPT1-208ENST00000552215 TCRBV5S1A1TA0A578 114 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms