RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 KDELR3O43731 214 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 MOSPD3O75425 235 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 KRT37O76014 449 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 TOP3BO95985 862 aaKnown RBP19.96■□□□□ 0.79
SSH1-209ENST00000551165 OXCT1P55809 520 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 ZNF235Q14590 738 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 SLC5A9Q2M3M2 681 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 RBM23Q86U06 439 aaKnown RBP19.96■□□□□ 0.79
SSH1-209ENST00000551165 SPOCK2Q92563 424 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 ACE2Q9BYF1 805 aaPredicted RBP19.96■□□□□ 0.79
SSH1-209ENST00000551165 MUC3BQ9H195 1237 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 ZFATQ9P243 1243 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 TRANK1O15050 2925 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 REV3LO60673 3130 aa19.96■□□□□ 0.79
SSH1-209ENST00000551165 MIA3Q5JRA6 1907 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 SRRM3A6NNA2 597 aaPredicted RBP19.95■□□□□ 0.78
SSH1-209ENST00000551165 TCP11X1B4DZS4 312 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 ADRA1DP25100 572 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 SLC7A9P82251 487 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 SLC18A2Q05940 514 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 ESRP1Q6NXG1 681 aaKnown RBP19.95■□□□□ 0.78
SSH1-209ENST00000551165 PKN3Q6P5Z2 889 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 POTEHQ6S545 545 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 TMA16Q96EY4 203 aaKnown RBP19.95■□□□□ 0.78
SSH1-209ENST00000551165 C20orf96Q9NUD7 363 aaPredicted RBP19.95■□□□□ 0.78
SSH1-209ENST00000551165 GBF1Q92538 1859 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 C5orf67F2Z3F1 127 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 H0Y626 953 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 CD160O95971 181 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 GMPRP36959 345 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 ARF5P84085 180 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 PCID2Q5JVF3 399 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 TEDDM1Q5T9Z0 273 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 LVRNQ6Q4G3 990 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 SETD3Q86TU7 594 aaPredicted RBP19.95■□□□□ 0.78
SSH1-209ENST00000551165 ATXN7L3BQ96GX2 97 aa19.95■□□□□ 0.78
SSH1-209ENST00000551165 TRAV19A0A0A6YYK7 116 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 MAGEB16A2A368 324 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 CLASP2O75122 1294 aaKnown RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 VIMP08670 466 aaKnown RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 CDC25CP30307 473 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 HNRNPH2P55795 449 aaKnown RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 MSLNQ13421 630 aaPredicted RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 SHHQ15465 462 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 TEAD2Q15562 447 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 TPGS1Q6ZTW0 290 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 CDKL2Q92772 493 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 SGSM3Q96HU1 749 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 POLR1EQ9GZS1 481 aaKnown RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 SSU72Q9NP77 194 aaKnown RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 UBA2Q9UBT2 640 aaPredicted RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 NOTCH4Q99466 2003 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 LEFTY2O00292 366 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 KRT38O76015 456 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 PRKCGP05129 697 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 GBP2P32456 591 aaPredicted RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 PBX2P40425 430 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 SEPT6Q14141 434 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 CYTH1Q15438 398 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 SIRPB2Q5JXA9 342 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 GPR158Q5T848 1215 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 KCNMB4Q86W47 210 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 DDX50Q9BQ39 737 aaKnown RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 SLC13A1Q9BZW2 595 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 NOD2Q9HC29 1040 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 IARS2Q9NSE4 1012 aaKnown RBP19.94■□□□□ 0.78
SSH1-209ENST00000551165 TCAF1Q9Y4C2 921 aa19.94■□□□□ 0.78
SSH1-209ENST00000551165 LPXNO60711 386 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 RHOP08100 348 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 ATXN1LP0C7T5 689 aaKnown RBP19.93■□□□□ 0.78
SSH1-209ENST00000551165 ARNTP27540 789 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 NEK3P51956 506 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 SLC18A1P54219 525 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 HTR3DQ70Z44 454 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 FAM217AQ8IXS0 508 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 ZNF599Q96NL3 588 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 MTIF3Q9H2K0 278 aaKnown RBP19.93■□□□□ 0.78
SSH1-209ENST00000551165 ARNT2Q9HBZ2 717 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 VPS45Q9NRW7 570 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 SH3BP1Q9Y3L3 701 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 HCFC2Q9Y5Z7 792 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 WDR91A4D1P6 747 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 LUC7L3O95232 432 aaKnown RBP19.93■□□□□ 0.78
SSH1-209ENST00000551165 LATS1O95835 1130 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 ALDOAP04075 364 aaKnown RBP19.93■□□□□ 0.78
SSH1-209ENST00000551165 CSKP41240 450 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 CNGA3Q16281 694 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 CPLX4Q7Z7G2 160 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 ADGRD2Q7Z7M1 963 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 PNPLA1Q8N8W4 532 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 HJURPQ8NCD3 748 aaPredicted RBP19.93■□□□□ 0.78
SSH1-209ENST00000551165 ACVR1CQ8NER5 493 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 DDI1Q8WTU0 396 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 APOPT1Q96IL0 206 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 PPP1R2P1Q96PQ5 205 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 FEM1AQ9BSK4 669 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 RETREG1Q9H6L5 497 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 PCMTD2Q9NV79 361 aa19.93■□□□□ 0.78
SSH1-209ENST00000551165 YBX2Q9Y2T7 364 aaKnown RBP19.93■□□□□ 0.78
SSH1-209ENST00000551165 OR51B4Q9Y5P0 310 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms