RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ZNF548Q8NEK5 533 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-221ENST00000550914 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
PTCH1-221ENST00000550914 LGMNQ99538 433 aa13.09□□□□□ -0.31
PTCH1-221ENST00000550914 TUBGCP2Q9BSJ2 902 aa13.09□□□□□ -0.31
PTCH1-221ENST00000550914 C1QTNF2Q9BXJ5 285 aa13.09□□□□□ -0.31
PTCH1-221ENST00000550914 ABCG4Q9H172 646 aa13.09□□□□□ -0.31
PTCH1-221ENST00000550914 POLR1BQ9H9Y6 1135 aa13.09□□□□□ -0.31
PTCH1-221ENST00000550914 TMPRSS4Q9NRS4 437 aa13.09□□□□□ -0.31
PTCH1-221ENST00000550914 PCDHB1Q9Y5F3 818 aa13.09□□□□□ -0.31
PTCH1-221ENST00000550914 CAPN8A6NHC0 703 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 FPGTO14772 594 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 TPP1O14773 563 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 USP12O75317 370 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 CSO75390 466 aaKnown RBP13.08□□□□□ -0.32
PTCH1-221ENST00000550914 C1QL1O75973 258 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 CD160O95971 181 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 PAK4O96013 591 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-221ENST00000550914 MAPKAPK2P49137 400 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 GABREP78334 506 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 RAPGEF1Q13905 1077 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 CAMK4Q16566 473 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 BROXQ5VW32 411 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 TRNP1Q6NT89 227 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 PARS2Q7L3T8 475 aaKnown RBP13.08□□□□□ -0.32
PTCH1-221ENST00000550914 FAM131BQ86XD5 332 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 ZNF677Q86XU0 584 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 IFI44Q8TCB0 444 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 WBP1Q96G27 269 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 TBATAQ96M53 351 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 CFAP57Q96MR6 1250 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 KLF6Q99612 283 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-221ENST00000550914 NAA15Q9BXJ9 866 aaKnown RBP13.08□□□□□ -0.32
PTCH1-221ENST00000550914 OSBPL1AQ9BXW6 950 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 HECAQ9UBI9 543 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-221ENST00000550914 SALL4Q9UJQ4 1053 aa13.08□□□□□ -0.32
PTCH1-221ENST00000550914 C16orf96A6NNT2 1141 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 GOLGA8SH3BPF8 625 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 ERVH48-1M5A8F1 160 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 TOR1BO14657 336 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 RAD51BO15315 384 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 AQP9O43315 295 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 NEBLO76041 1014 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 GSRP00390 522 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 PRB1P04280 392 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 MPOP05164 745 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 UCHL3P15374 230 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 RHOQP17081 205 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 ERCC5P28715 1186 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-221ENST00000550914 DNA2P51530 1060 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 TMPRSS3P57727 454 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 PFN3P60673 137 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 NOMO3P69849 1222 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 POLD3Q15054 466 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-221ENST00000550914 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 ZNF805Q5CZA5 627 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 ZNF542PQ5EBM4 170 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 DRC7Q8IY82 874 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 MAPK15Q8TD08 544 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 BTN2A2Q8WVV5 523 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 ARHGEF2Q92974 986 aaKnown RBP13.07□□□□□ -0.32
PTCH1-221ENST00000550914 STK33Q9BYT3 514 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 DPH1Q9BZG8 443 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 OSBPL2Q9H1P3 480 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 MAGEH1Q9H213 219 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 ZDHHC6Q9H6R6 413 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 ASCL3Q9NQ33 180 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 THSD1Q9NS62 852 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 OR12D3Q9UGF7 316 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 IPO11Q9UI26 975 aaKnown RBP13.07□□□□□ -0.32
PTCH1-221ENST00000550914 HPCAL4Q9UM19 191 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 FCF1Q9Y324 198 aaKnown RBP13.07□□□□□ -0.32
PTCH1-221ENST00000550914 FHOD1Q9Y613 1164 aa13.07□□□□□ -0.32
PTCH1-221ENST00000550914 LRRK1Q38SD2 2015 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 SPTA1P02549 2419 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 EME2A4GXA9 379 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-221ENST00000550914 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-221ENST00000550914 IGLON5A6NGN9 336 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 F8VZ95 297 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 NEMP1O14524 444 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 TCEA3O75764 348 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 POP4O95707 220 aaKnown RBP13.06□□□□□ -0.32
PTCH1-221ENST00000550914 JUNDP17535 347 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 ADRA1BP35368 520 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 SNRPD1P62314 119 aaKnown RBP13.06□□□□□ -0.32
PTCH1-221ENST00000550914 CXADRP78310 365 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 RHDQ02161 417 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 PDE1CQ14123 709 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-221ENST00000550914 PTK2BQ14289 1009 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 ISXQ2M1V0 245 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 TAF3Q5VWG9 929 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 NOP9Q86U38 636 aaKnown RBP13.06□□□□□ -0.32
PTCH1-221ENST00000550914 NLRP14Q86W24 1093 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 OR2AP1Q8NGE2 309 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 EPS8L1Q8TE68 723 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 SNRNP27Q8WVK2 155 aaKnown RBP13.06□□□□□ -0.32
PTCH1-221ENST00000550914 GLMNQ92990 594 aa13.06□□□□□ -0.32
PTCH1-221ENST00000550914 TM6SF2Q9BZW4 377 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms