RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 BCKDHBP21953 392 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 OXTRP30559 389 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 GKP32189 559 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 PTPN7P35236 360 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 NR2C2P49116 596 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 SLC36A4Q6YBV0 504 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 C11orf74Q86VG3 221 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 CCDC13Q8IYE1 715 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 HDDC3Q8N4P3 179 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 P3H4Q92791 437 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 HAUS1Q96CS2 278 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 HDAC11Q96DB2 347 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 TOE1Q96GM8 510 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 LGMNQ99538 433 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 HERPUD2Q9BSE4 406 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 SEMA4AQ9H3S1 761 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 MBD1Q9UIS9 605 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 RAB23Q9ULC3 237 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 SPAG17Q6Q759 2223 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 PTPRZ1P23471 2315 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 NUMA1Q14980 2115 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 PPP1R12AO14974 1030 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 NDUFS2O75306 463 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 RNASEH2AO75792 299 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 NEBLO76041 1014 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 TJP3O95049 919 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 PECAM1P16284 738 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 CD6P30203 668 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 HSPA9P38646 679 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 MMP13P45452 471 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 METAP1P53582 386 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 PPIDQ08752 370 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 AP1B1Q10567 949 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 HNRNPDQ14103 355 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 LPAL2Q16609 132 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 ZNF569Q5MCW4 686 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 USP30Q70CQ3 517 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 SRLQ86TD4 932 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 KBTBD6Q86V97 674 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 AADATQ8N5Z0 425 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 LRIG1Q96JA1 1093 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 OLFM3Q96PB7 478 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 PSKH2Q96QS6 385 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 BRD8Q9H0E9 1235 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 NEUROG2Q9H2A3 272 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 EPC1Q9H2F5 836 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 DYRK4Q9NR20 520 aa16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 WSB2Q9NYS7 404 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-209ENST00000550872 USP27XA6NNY8 438 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 APOC4-APOC2K7ER74 178 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 PLK4O00444 970 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 INSIG1O15503 277 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 KIF5CO60282 957 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 RHOBTB1O94844 696 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 IGLV3-19P01714 112 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 APOC2P02655 101 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 CCNB1P14635 433 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 RGRP47804 291 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 CSNK1DP48730 415 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 SCNN1BP51168 640 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 RPL6Q02878 288 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 NSUN2Q08J23 767 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 ELF2Q15723 593 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 PLK5Q496M5 336 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 SEL1L2Q5TEA6 688 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 DCAF12L1Q5VU92 463 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 B4GALNT4Q76KP1 1039 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 MAML1Q92585 1016 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 FATE1Q969F0 183 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 ARRDC3Q96B67 414 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 PPP1R16AQ96I34 528 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 TLR10Q9BXR5 811 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 BTBD1Q9H0C5 482 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 NT5MQ9NPB1 228 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 RBM22Q9NW64 420 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 SERGEFQ9UGK8 458 aa16.45■□□□□ 0.22
CHMP1A-209ENST00000550872 THADAQ6YHU6 1953 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 GOLGA6L9A6NEM1 432 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 KCNK1O00180 336 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 RNF103O00237 685 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 KCNK3O14649 394 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 MUSKO15146 869 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 JCHAINP01591 159 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 UGT2B4P06133 528 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 ACSL1P33121 698 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 DRD3P35462 400 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 ZNF33AQ06730 810 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 ITKQ08881 620 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 CCDC15Q0P6D6 951 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 CNTN1Q12860 1018 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 GRM3Q14832 879 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 GDPD4Q6W3E5 623 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 LPCAT2Q7L5N7 544 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 ZC3H18Q86VM9 953 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 TMEFF1Q8IYR6 380 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 PGBD5Q8N414 524 aa16.44■□□□□ 0.22
CHMP1A-209ENST00000550872 DEFB119Q8N690 84 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms