RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 ELANEP08246 267 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 UBA1P22314 1058 aaKnown RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 CDC25AP30304 524 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 RAP1GAPP47736 663 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 NUCB2P80303 420 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 ARHGAP1Q07960 439 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 TUBB3Q13509 450 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 ACOX1Q15067 660 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 STXBP2Q15833 593 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 GALNTL6Q49A17 601 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 PDCD4Q53EL6 469 aaKnown RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 ATG16L1Q676U5 607 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 MSANTD2Q6P1R3 559 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 FSTL5Q8N475 847 aaPredicted RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 CCDC89Q8N998 374 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 LINC00301Q8NCQ3 95 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 OSCP1Q8WVF1 389 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 SNRNP27Q8WVK2 155 aaKnown RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 HMGB4Q8WW32 186 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 ST8SIA4Q92187 359 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 PAAF1Q9BRP4 392 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 MMTAG2Q9BU76 263 aaKnown RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 VN1R3Q9BXE9 311 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 GPR87Q9BY21 358 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 GLT8D2Q9H1C3 349 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 ZSCAN16Q9H4T2 348 aaPredicted RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 TMLHEQ9NVH6 421 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 IRAK4Q9NWZ3 460 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 PPP4R1LQ9P1A2 415 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 WRAP73Q9P2S5 460 aaPredicted RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 ADD3Q9UEY8 706 aaKnown RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 DDX25Q9UHL0 483 aaKnown RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 SERTAD3Q9UJW9 196 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 RCOR1Q9UKL0 485 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 ZHX1Q9UKY1 873 aaPredicted RBP6.17□□□□□ -1.42
PRDM4-206ENST00000550659 DNAJC16Q9Y2G8 782 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 SLC27A6Q9Y2P4 619 aa6.17□□□□□ -1.42
PRDM4-206ENST00000550659 GSTTP1A0A1W2PQM5 241 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 GXYLT2A0PJZ3 443 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 DYTNA2CJ06 578 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 TMEM150BA6NC51 233 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 NPEPPSL1A6NEC2 478 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 FAM90A20PA6NIJ5 464 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 TRIM24O15164 1050 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 FIBPO43427 364 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 FOXS1O43638 330 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 NEMFO60524 1076 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 TSPAN3O60637 253 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 ZFPL1O95159 310 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 CER1O95813 267 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 ICAM3P32942 547 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 TXKP42681 527 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 MAN2A2P49641 1150 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 TIRAPP58753 221 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 SP4Q02446 784 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 FPGSQ05932 587 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 SF3A3Q12874 501 aaKnown RBP eCLIP6.16□□□□□ -1.42
PRDM4-206ENST00000550659 SLC39A14Q15043 492 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 UGCGQ16739 394 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 CD300EQ496F6 205 aaPredicted RBP6.16□□□□□ -1.42
PRDM4-206ENST00000550659 CTXN3Q4LDR2 81 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 RILPL1Q5EBL4 403 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 DGAT2L7PQ6IED9 249 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 SHC4Q6S5L8 630 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 MOXD1Q6UVY6 613 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 CLEC9AQ6UXN8 241 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 KRBA2Q6ZNG9 492 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 SYT13Q7L8C5 426 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 NIPA1Q7RTP0 329 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 GDF7Q7Z4P5 450 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 CTU1Q7Z7A3 348 aaKnown RBP6.16□□□□□ -1.42
PRDM4-206ENST00000550659 TMEM132CQ8N3T6 1108 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 LRRC71Q8N4P6 559 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 RAET1EQ8TD07 263 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 ATRIPQ8WXE1 791 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 CENPIQ92674 756 aaPredicted RBP6.16□□□□□ -1.42
PRDM4-206ENST00000550659 FAM136AQ96C01 138 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 PCYT2Q99447 389 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 PAIP1Q9H074 479 aaKnown RBP6.16□□□□□ -1.42
PRDM4-206ENST00000550659 ABHD16BQ9H3Z7 469 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 GOLPH3LQ9H4A5 285 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 TRIM36Q9NQ86 728 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 OLA1Q9NTK5 396 aaKnown RBP6.16□□□□□ -1.42
PRDM4-206ENST00000550659 LIN7CQ9NUP9 197 aaKnown RBP6.16□□□□□ -1.42
PRDM4-206ENST00000550659 EIF2B4Q9UI10 523 aaKnown RBP6.16□□□□□ -1.42
PRDM4-206ENST00000550659 KCND3Q9UK17 655 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 TBX20Q9UMR3 447 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 PCDHA7Q9UN72 937 aa6.16□□□□□ -1.42
PRDM4-206ENST00000550659 A0A087X0M5 115 aa6.15□□□□□ -1.42
PRDM4-206ENST00000550659 A0A1B0GX30 115 aa6.15□□□□□ -1.42
PRDM4-206ENST00000550659 VWA3AA6NCI4 1184 aa6.15□□□□□ -1.42
PRDM4-206ENST00000550659 SAC3D1A6NKF1 404 aa6.15□□□□□ -1.42
PRDM4-206ENST00000550659 CHMP2AO43633 222 aa6.15□□□□□ -1.42
PRDM4-206ENST00000550659 STBD1O95210 358 aa6.15□□□□□ -1.42
PRDM4-206ENST00000550659 GGPS1O95749 300 aa6.15□□□□□ -1.42
PRDM4-206ENST00000550659 PGK1P00558 417 aa6.15□□□□□ -1.42
PRDM4-206ENST00000550659 CFIP05156 583 aa6.15□□□□□ -1.42
PRDM4-206ENST00000550659 HNRNPA1P09651 372 aaKnown RBP eCLIP6.15□□□□□ -1.42
PRDM4-206ENST00000550659 OR52Z1P0C646 297 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms