RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ELNP15502 786 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 HLA-DPA1P20036 260 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 FGFR3P22607 806 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 ELF1P32519 619 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 ETFBP38117 255 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 VHLP40337 213 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 PBX3P40426 434 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SLC11A2P49281 568 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 RPL14P50914 215 aaKnown RBP9.05□□□□□ -0.96
TMEM116-209ENST00000550020 DNAJB13P59910 316 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 AP2B1P63010 937 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 KDSRQ06136 332 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SLC34A1Q06495 639 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 EFEMP1Q12805 493 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 TRIM32Q13049 653 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 POU6F1Q14863 301 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 POLD3Q15054 466 aaPredicted RBP9.05□□□□□ -0.96
TMEM116-209ENST00000550020 TAF11Q15544 211 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 MS4A13Q5J8X5 152 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 RABGAP1LQ5R372 815 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SH2D4BQ5SQS7 431 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 C10orf120Q5SQS8 335 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 TSTD2Q5T7W7 516 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 FAM171A1Q5VUB5 890 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SEL1L3Q68CR1 1132 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 DENND5AQ6IQ26 1287 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 LRRC8EQ6NSJ5 796 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 AAGABQ6PD74 315 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 EPGNQ6UW88 154 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 CTU1Q7Z7A3 348 aaKnown RBP9.05□□□□□ -0.96
TMEM116-209ENST00000550020 ZNF280BQ86YH2 543 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SLC22A9Q8IVM8 553 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 TEX26Q8N6G2 289 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 TDRD5Q8NAT2 981 aaKnown RBP9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SPATA22Q8NHS9 363 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 STYXQ8WUJ0 223 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 JADE3Q92613 823 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 IFT43Q96FT9 208 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 ATXN7L3BQ96GX2 97 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 ELMO2Q96JJ3 720 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 CNDP1Q96KN2 507 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SORT1Q99523 831 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SERPINI1Q99574 410 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 MIPEPQ99797 713 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 DDX50Q9BQ39 737 aaKnown RBP9.05□□□□□ -0.96
TMEM116-209ENST00000550020 POLR1EQ9GZS1 481 aaKnown RBP9.05□□□□□ -0.96
TMEM116-209ENST00000550020 NMUR1Q9HB89 426 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 TREX1Q9NSU2 369 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.05□□□□□ -0.96
TMEM116-209ENST00000550020 NCKIPSDQ9NZQ3 722 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 HACD3Q9P035 362 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 SLC17A6Q9P2U8 582 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 STX18Q9P2W9 335 aaKnown RBP9.05□□□□□ -0.96
TMEM116-209ENST00000550020 RIMKLBQ9ULI2 386 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 ARHGAP26Q9UNA1 814 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 PHF24Q9UPV7 400 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 PRG3Q9Y2Y8 225 aaPredicted RBP9.05□□□□□ -0.96
TMEM116-209ENST00000550020 L3MBTL1Q9Y468 752 aa9.05□□□□□ -0.96
TMEM116-209ENST00000550020 CASP8AP2Q9UKL3 1982 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 A0A1W2PQ45 241 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 A0A1W2PQY0 241 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 SLC12A8A0AV02 714 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 PRR5-ARHGAP8B1AHC4 643 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 F5H5T6 163 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 LIN7AO14910 233 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 LYPLA1O75608 230 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 PSMG1O95456 288 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 PENKP01210 267 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 IGLV3-27P01718 113 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 AHSGP02765 367 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 PRKCGP05129 697 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 FGF1P05230 155 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 OR4Q2P0C623 313 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 HAPLN1P10915 354 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 GNAZP19086 355 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 NCF2P19878 526 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 ATP5F1P24539 256 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 ARCN1P48444 511 aaKnown RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 TUFMP49411 452 aaKnown RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 CSRP3P50461 194 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 NAA20P61599 178 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 PRAMEP78395 509 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 ARHGAP8P85298 464 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 MSLNQ13421 630 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 ZNF235Q14590 738 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 RFTN1Q14699 578 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 DDR2Q16832 855 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 MUM1Q2TAK8 710 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 MGAT5BQ3V5L5 792 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 PIK3R6Q5UE93 754 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 C1orf146Q5VVC0 180 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 SNX30Q5VWJ9 437 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 ZNF470Q6ECI4 717 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 MRNIPQ6NTE8 343 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 KDELC1Q6UW63 502 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 C16orf89Q6UX73 402 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 SDCCAG8Q86SQ7 713 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 RTN4RL1Q86UN2 441 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 APLFQ8IW19 511 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms