RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PPP2R2CQ9Y2T4 447 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 FAM186AA6NE01 2351 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 RALGAPA1Q6GYQ0 2036 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 LRRK1Q38SD2 2015 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RIF1Q5UIP0 2472 aaKnown RBP12.08□□□□□ -0.48
PFDN5-208ENST00000549995 BCLAF3A2AJT9 711 aaKnown RBP12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RNF103O00237 685 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 APOL1O14791 398 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 MATN3O15232 486 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 AP1G1O43747 822 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 LEFTY1O75610 366 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 IL1BP01584 269 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 TGM1P22735 817 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 ACSL1P33121 698 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 MAPK8P45983 427 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RECQLP46063 649 aaPredicted RBP12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RGRP47804 291 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 PSMD8P48556 350 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RENBPP51606 427 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 METAP1P53582 386 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 ADPRHP54922 357 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RWDD2BP57060 319 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RHOAP61586 193 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
PFDN5-208ENST00000549995 ADCY2Q08462 1091 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 SLC10A7Q0GE19 358 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 LBRQ14739 615 aaKnown RBP12.08□□□□□ -0.48
PFDN5-208ENST00000549995 MYLK3Q32MK0 819 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 TIGD7Q6NT04 549 aaPredicted RBP12.08□□□□□ -0.48
PFDN5-208ENST00000549995 BBS12Q6ZW61 710 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 LPCAT2Q7L5N7 544 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 NETO2Q8NC67 525 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 C1orf216Q8TAB5 229 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RUBCNQ92622 972 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 ANP32BQ92688 251 aaKnown RBP12.08□□□□□ -0.48
PFDN5-208ENST00000549995 FOXJ1Q92949 421 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RNF25Q96BH1 459 aaPredicted RBP12.08□□□□□ -0.48
PFDN5-208ENST00000549995 ECHDC3Q96DC8 303 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 PPP1R16AQ96I34 528 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 ORAI3Q9BRQ5 295 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 BTBD1Q9H0C5 482 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 FBXL12Q9NXK8 326 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 DKK3Q9UBP4 350 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 RAB23Q9ULC3 237 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 NCKAP1Q9Y2A7 1128 aa12.08□□□□□ -0.48
PFDN5-208ENST00000549995 A0A1W2PP55 124 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 METTL12A8MUP2 240 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 APOC4-APOC2K7ER74 178 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 MUSKO15146 869 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 LATO43561 262 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 SEMA4FO95754 770 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 APOC2P02655 101 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 CCR5P51681 352 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 SUOXP51687 545 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 TAS2R38P59533 333 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 AP1S1P61966 158 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 RPL6Q02878 288 aaKnown RBP12.07□□□□□ -0.48
PFDN5-208ENST00000549995 RAD51Q06609 339 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 CNTN1Q12860 1018 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 KLF1Q13351 362 aaPredicted RBP12.07□□□□□ -0.48
PFDN5-208ENST00000549995 PRKD1Q15139 912 aaPredicted RBP12.07□□□□□ -0.48
PFDN5-208ENST00000549995 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 DCAF12L1Q5VU92 463 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 NEK5Q6P3R8 708 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 LEKR1Q6ZMV7 388 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 PRR23BQ6ZRT6 265 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 BZW1Q7L1Q6 419 aaKnown RBP12.07□□□□□ -0.48
PFDN5-208ENST00000549995 PEX26Q7Z412 305 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 ZSCAN30Q86W11 494 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 TRIM69Q86WT6 500 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 ZNF354CQ86Y25 554 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 REXO1L1PQ8IX06 675 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 PGBD5Q8N414 524 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 HDDC3Q8N4P3 179 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 TSEN2Q8NCE0 465 aaKnown RBP12.07□□□□□ -0.48
PFDN5-208ENST00000549995 OR2T34Q8NGX1 318 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 RAB7BQ96AH8 199 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 ERLEC1Q96DZ1 483 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 NSMCE3Q96MG7 304 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 ZNF641Q96N77 438 aaPredicted RBP12.07□□□□□ -0.48
PFDN5-208ENST00000549995 NUDCD1Q96RS6 583 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 IL12RB2Q99665 862 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 HERPUD2Q9BSE4 406 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 CINPQ9BW66 212 aaPredicted RBP12.07□□□□□ -0.48
PFDN5-208ENST00000549995 TM6SF2Q9BZW4 377 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 NEUROG2Q9H2A3 272 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 PREBQ9HCU5 417 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 PILRBQ9UKJ0 227 aa12.07□□□□□ -0.48
PFDN5-208ENST00000549995 EP300Q09472 2414 aaPredicted RBP12.06□□□□□ -0.48
PFDN5-208ENST00000549995 TRAFD1O14545 582 aaPredicted RBP12.06□□□□□ -0.48
PFDN5-208ENST00000549995 PPP1R12AO14974 1030 aaPredicted RBP12.06□□□□□ -0.48
PFDN5-208ENST00000549995 SPINT1O43278 529 aa12.06□□□□□ -0.48
PFDN5-208ENST00000549995 CST8O60676 142 aa12.06□□□□□ -0.48
PFDN5-208ENST00000549995 SOCS5O75159 536 aa12.06□□□□□ -0.48
PFDN5-208ENST00000549995 RNASEH2AO75792 299 aaKnown RBP12.06□□□□□ -0.48
PFDN5-208ENST00000549995 FTCDO95954 541 aa12.06□□□□□ -0.48
PFDN5-208ENST00000549995 IGHV4-34P06331 123 aa12.06□□□□□ -0.48
PFDN5-208ENST00000549995 NUDT1P36639 197 aa12.06□□□□□ -0.48
PFDN5-208ENST00000549995 PTGER3P43115 390 aa12.06□□□□□ -0.48
PFDN5-208ENST00000549995 NEK3P51956 506 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms