RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SMOQ99835 787 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 MTMR10Q9NXD2 777 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 MYBPHLA2RUH7 354 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 CASTOR2A6NHX0 329 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 HNRNPRO43390 633 aaKnown RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PLIN3O60664 434 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 SNNO75324 88 aaPredicted RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 GSRP00390 522 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 ITGA2BP08514 1039 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 ITGAXP20702 1163 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PRKCHP24723 683 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 CRABP2P29373 138 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 GRK4P32298 578 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PCLAFQ15004 111 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PDSS2Q86YH6 399 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 RSPH1Q8WYR4 309 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PCED1BQ96HM7 432 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 CDRT15Q96T59 188 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 MTF2Q9Y483 593 aaPredicted RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 HEMK1Q9Y5R4 338 aaPredicted RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 SPAG6O75602 509 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 JUNP05412 331 aaKnown RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PIRTP0C851 137 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 NOS2P35228 1153 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PRAMEP78395 509 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 CNGA3Q16281 694 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 LRRC23Q53EV4 343 aaPredicted RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 C6orf52Q5T4I8 152 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PACS1Q6VY07 963 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 ARHGAP22Q7Z5H3 698 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 IFNEQ86WN2 208 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 DCBLD1Q8N8Z6 715 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 GPR152Q8TDT2 470 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PRPF18Q99633 342 aaKnown RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 SLC39A3Q9BRY0 314 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 FTHL17Q9BXU8 183 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 DDIT4Q9NX09 232 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 RCOR3Q9P2K3 495 aaPredicted RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 GMPR2Q9P2T1 348 aaKnown RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 ARHGEF37A1IGU5 675 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 KLF11O14901 512 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 POMCP01189 267 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 WASHC5Q12768 1159 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 PDK1Q15118 436 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 RBM44Q6ZP01 1051 aaKnown RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 SNX32Q86XE0 403 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 DENND6AQ8IWF6 608 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 SIX6OS1Q8N1H7 587 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 HIC2Q96JB3 615 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 FCRL3Q96P31 734 aaPredicted RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 NR1H4Q96RI1 486 aaPredicted RBP11.25□□□□□ -0.61
LINC00661-204ENST00000549354 CNGB3Q9NQW8 809 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 STARD7Q9NQZ5 370 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 SSX2IPQ9Y2D8 614 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 DTNAQ9Y4J8 743 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 USP3Q9Y6I4 520 aa11.25□□□□□ -0.61
LINC00661-204ENST00000549354 C15orf38-AP3S2A0A0A6YYH1 394 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 UQCRBP14927 111 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 TUBB3Q13509 450 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 SLC12A1Q13621 1099 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 TLR1Q15399 786 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 SLC5A9Q2M3M2 681 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 CMPK2Q5EBM0 449 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 INTS6LQ5JSJ4 861 aaKnown RBP11.24□□□□□ -0.61
LINC00661-204ENST00000549354 BHLHA9Q7RTU4 235 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 ARPINQ7Z6K5 226 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 CEP70Q8NHQ1 597 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 ZNF296Q8WUU4 475 aaPredicted RBP11.24□□□□□ -0.61
LINC00661-204ENST00000549354 CDKL2Q92772 493 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 ABTB1Q969K4 478 aaPredicted RBP11.24□□□□□ -0.61
LINC00661-204ENST00000549354 PGAP3Q96FM1 320 aaPredicted RBP11.24□□□□□ -0.61
LINC00661-204ENST00000549354 SORT1Q99523 831 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 NPAS2Q99743 824 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 ELAC1Q9H777 363 aaKnown RBP11.24□□□□□ -0.61
LINC00661-204ENST00000549354 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 TMEM30AQ9NV96 361 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 GIMAP2Q9UG22 337 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 PATJQ8NI35 1801 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 GON4LQ3T8J9 2241 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 A0A096LPK6 155 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 FAM159BA6NKW6 160 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 MT-ND1P03886 318 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 FYNP06241 537 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 HMBSP08397 361 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 CPA3P15088 417 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 CHRNA4P43681 627 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 SCNN1BP51168 640 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 DAOAP59103 153 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 MAXP61244 160 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 USP10Q14694 798 aaKnown RBP11.24□□□□□ -0.61
LINC00661-204ENST00000549354 PM20D1Q6GTS8 502 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 METTL23Q86XA0 190 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 IRGQQ8WZA9 623 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 PPWD1Q96BP3 646 aaKnown RBP11.24□□□□□ -0.61
LINC00661-204ENST00000549354 SMARCD1Q96GM5 515 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 SLC9A7Q96T83 725 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 LIN28AQ9H9Z2 209 aaKnown RBP11.24□□□□□ -0.61
LINC00661-204ENST00000549354 FZD10Q9ULW2 581 aa11.24□□□□□ -0.61
LINC00661-204ENST00000549354 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms