RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 C16orf72Q14CZ0 275 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 TSTD2Q5T7W7 516 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 ZC3HC1Q86WB0 502 aaKnown RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 CLVS1Q8IUQ0 354 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 LRRC43Q8N309 656 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 SMYD1Q8NB12 490 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 COPS5Q92905 334 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 DCUN1D5Q9BTE7 237 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 ANKRD60Q9BZ19 345 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 UNC93B1Q9H1C4 597 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 TRPC7Q9HCX4 862 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 DUS2Q9NX74 493 aaKnown RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 CACNA2D2Q9NY47 1150 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 UTP6Q9NYH9 597 aaKnown RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 RBPJLQ9UBG7 517 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 ANKRD6Q9Y2G4 727 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 A0A0G2JMZ2 1700 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 HEATR9A2RTY3 570 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 TMX2-CTNND1H3BSU7 103 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 FBP2O00757 339 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 TRIM24O15164 1050 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 ZBTB24O43167 697 aaPredicted RBP13.89□□□□□ -0.19
HDAC7-228ENST00000548938 FRG1Q14331 258 aaKnown RBP13.89□□□□□ -0.19
HDAC7-228ENST00000548938 LDLRAD1Q5T700 205 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 REP15Q6BDI9 236 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 PLPPR4Q7Z2D5 763 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 CPNE9Q8IYJ1 553 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 PELI3Q8N2H9 469 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 LZTR1Q8N653 840 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 STON2Q8WXE9 905 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 PPP1R14BQ96C90 147 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 SGF29Q96ES7 293 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 MAELQ96JY0 434 aaKnown RBP13.89□□□□□ -0.19
HDAC7-228ENST00000548938 OSBPL6Q9BZF3 934 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 CLK4Q9HAZ1 481 aaKnown RBP13.89□□□□□ -0.19
HDAC7-228ENST00000548938 SETD4Q9NVD3 440 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 FAIMQ9NVQ4 179 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 GTSE1Q9NYZ3 720 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 GMPR2Q9P2T1 348 aaKnown RBP13.89□□□□□ -0.19
HDAC7-228ENST00000548938 TCRBV3S1A0A5B6 114 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 SH3PXD2BA1X283 911 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 ZNF839A8K0R7 811 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 SOCS2O14508 198 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 TIPRLO75663 272 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 C22orf31O95567 290 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 MATKP42679 507 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 PSMD8P48556 350 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 PRKAA2P54646 552 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 BCAT1P54687 386 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 TUBA4AP68366 448 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 LRP8Q14114 963 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 PAFAH1B3Q15102 231 aaKnown RBP13.89□□□□□ -0.19
HDAC7-228ENST00000548938 ANKDD1AQ495B1 522 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 DCAF6Q58WW2 860 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 C6orf10Q5SRN2 563 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 FAM219BQ5XKK7 198 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 KCTD11Q693B1 232 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 LAYNQ6UX15 382 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 PATL1Q86TB9 770 aaKnown RBP13.89□□□□□ -0.19
HDAC7-228ENST00000548938 SPNS2Q8IVW8 549 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 PPWD1Q96BP3 646 aaKnown RBP13.89□□□□□ -0.19
HDAC7-228ENST00000548938 ISOC1Q96CN7 298 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 SPATA33Q96N06 139 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 PLGRKTQ9HBL7 147 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 RNF19AQ9NV58 838 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 UBP1Q9NZI7 540 aa13.89□□□□□ -0.19
HDAC7-228ENST00000548938 IPO11Q9UI26 975 aaKnown RBP13.89□□□□□ -0.19
HDAC7-228ENST00000548938 IQCA1LA6NCM1 817 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 FOXD2O60548 495 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-228ENST00000548938 BMP10O95393 424 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 PGK1P00558 417 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 VTNP04004 478 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 GNAO1P09471 354 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 HNRNPLP14866 589 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDAC7-228ENST00000548938 CYP2B6P20813 491 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 GABRB3P28472 473 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 SLC7A1P30825 629 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 CD68P34810 354 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-228ENST00000548938 FAM187BQ17R55 369 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 NHSL2Q5HYW2 709 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 CELF3Q5SZQ8 465 aaKnown RBP13.88□□□□□ -0.19
HDAC7-228ENST00000548938 ARHGAP17Q68EM7 881 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 CNSTQ6PJW8 725 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 Q6ZNX1 250 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 ZBTB49Q6ZSB9 765 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 CHSY3Q70JA7 882 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 HM13Q8TCT9 377 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 RHOJQ9H4E5 214 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 FAM124BQ9H5Z6 455 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-228ENST00000548938 CCDC167Q9P0B6 97 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 FAM72CH0Y354 149 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 EEF2KO00418 725 aaKnown RBP13.88□□□□□ -0.19
HDAC7-228ENST00000548938 DCLK1O15075 740 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 CYP2C8P10632 490 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 TMEM62Q0P6H9 643 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 SLC12A1Q13621 1099 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 SLC25A52Q3SY17 297 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 FAM72AQ5TYM5 149 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 FAM72DQ6L9T8 149 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms