RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 EPHA8P29322 1005 aaPredicted RBP6.83□□□□□ -1.32
SCAF11-211ENST00000547950 AKT2P31751 481 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 L1CAMP32004 1257 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 NUDT1P36639 197 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 PTPN9P43378 593 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 RXRGP48443 463 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 SERPINH1P50454 418 aaKnown RBP6.83□□□□□ -1.32
SCAF11-211ENST00000547950 HDAC4P56524 1084 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CLDN6P56747 220 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ARF5P84085 180 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CYP4F3Q08477 520 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 OVGP1Q12889 678 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 PTP4A2Q12974 167 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF284Q2VY69 593 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 SEL1L3Q68CR1 1132 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 NEK5Q6P3R8 708 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 WDR59Q6PJI9 974 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 C19orf48Q6RUI8 117 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF783Q6ZMS7 281 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 STRADAQ7RTN6 431 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 SLFN11Q7Z7L1 901 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 IQCHQ86VS3 1027 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 HORMAD1Q86X24 394 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 PARP9Q8IXQ6 854 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 PYROXD2Q8N2H3 581 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 OXR1Q8N573 874 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 AOPEPQ8N6M6 819 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 PCDH20Q8N6Y1 951 aaKnown RBP6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CCDC185Q8N715 623 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 NETO2Q8NC67 525 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 OR6K2Q8NGY2 324 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CENPIQ92674 756 aaPredicted RBP6.83□□□□□ -1.32
SCAF11-211ENST00000547950 FAM131CQ96AQ9 280 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 PPP1R16AQ96I34 528 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 FEM1CQ96JP0 617 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 AGPAT1Q99943 283 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CALN1Q9BXU9 219 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 HDAC8Q9BY41 377 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 SLC17A9Q9BYT1 436 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 TM6SF2Q9BZW4 377 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CEP44Q9C0F1 390 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ZDHHC6Q9H6R6 413 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ERVMER34-1Q9H9K5 563 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF212Q9UDV6 495 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ZFR2Q9UPR6 939 aaKnown RBP6.83□□□□□ -1.32
SCAF11-211ENST00000547950 USP24Q9UPU5 2620 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 FRYQ5TBA9 3013 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CACNA1EQ15878 2313 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 MAP1BP46821 2468 aaKnown RBP6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CACNA1BQ00975 2339 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 SIGLEC16A6NMB1 481 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 TMCO5BA8MYB1 307 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 KRIT1O00522 736 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 TRIM38O00635 465 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 YKT6O15498 198 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 TEX33O43247 280 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 BUB1O43683 1085 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 KDELR3O43731 214 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 CREB3O43889 395 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 RAMP2O60895 175 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 CD160O95971 181 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 CCDC172P0C7W6 258 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 ADRB3P13945 408 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 CKMT2P17540 419 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 HNRNPA2B1P22626 353 aaKnown RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 EPHB2P29323 1055 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 ETFBP38117 255 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 MAPKAPK2P49137 400 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 CCNHP51946 323 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 NEK3P51956 506 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 RPL7AP62424 266 aaKnown RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 NRG1Q02297 640 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 TYRO3Q06418 890 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 SGCGQ13326 291 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 NCAPHQ15003 741 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 POLD3Q15054 466 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 SMAD1Q15797 465 aaKnown RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 MYLK3Q32MK0 819 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF542PQ5EBM4 170 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 EFHC2Q5JST6 749 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 CCDC183Q5T5S1 534 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 ACAD10Q6JQN1 1059 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 DNAJC24Q6P3W2 148 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 DCUN1D2Q6PH85 259 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 Q6ZSR6 202 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 TTC7BQ86TV6 843 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 NLRP14Q86W24 1093 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 PROSER1Q86XN7 944 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 PHF13Q86YI8 300 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 SLC25A45Q8N413 288 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 OR13H1Q8NG92 308 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 HNRNPLLQ8WVV9 542 aaKnown RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 ARHGEF2Q92974 986 aaKnown RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 TBC1D31Q96DN5 1066 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 MCEEQ96PE7 176 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 ERGIC2Q96RQ1 377 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 MAGEH1Q9H213 219 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 CAAP1Q9H8G2 361 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 KLHL11Q9NVR0 708 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 TMEM248Q9NWD8 314 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms