RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 KRIT1O00522 736 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 BCAT2O15382 392 aaPredicted RBP19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 POP4O95707 220 aaKnown RBP19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 CD27P26842 260 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 NOP2P46087 812 aaKnown RBP19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 ID4P47928 161 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 HADHBP55084 474 aaKnown RBP19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 TAS2R38P59533 333 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 IL10RBQ08334 325 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 ZFYVE27Q5T4F4 411 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 ERN2Q76MJ5 926 aaKnown RBP19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 MAP7D3Q8IWC1 876 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 PCDH19Q8TAB3 1148 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 RAPGEF5Q92565 580 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 PPP1R16AQ96I34 528 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 LRIG1Q96JA1 1093 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 BAG1Q99933 345 aaPredicted RBP19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 ORAI3Q9BRQ5 295 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 ZNF670Q9BS34 389 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 HDAC8Q9BY41 377 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 KDM4CQ9H3R0 1056 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 DLL3Q9NYJ7 618 aa19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 IPO11Q9UI26 975 aaKnown RBP19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 CDV3Q9UKY7 258 aaKnown RBP19.02■□□□□ 0.64
PRPF40B-206ENST00000547764 PALMO75781 387 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 IGSF6O95976 241 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 ENGP17813 658 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 SDHBP21912 280 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 KDELR1P24390 212 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 ITGB7P26010 798 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 SERPINB6P35237 376 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 SLC1A1P43005 524 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 CCR5P51681 352 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 LIMK1P53667 647 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 PPP2CBP62714 309 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 PPP2CAP67775 309 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 CCDC15Q0P6D6 951 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 ANKRD20A8PQ5CZ79 823 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 STPG1Q5TH74 334 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 TMEM139Q8IV31 216 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 EXOC2Q96KP1 924 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 EBF2Q9HAK2 575 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 REXO2Q9Y3B8 237 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 HYOU1Q9Y4L1 999 aa19.01■□□□□ 0.63
PRPF40B-206ENST00000547764 A0A0A6YYK5 440 aaPredicted RBP19■□□□□ 0.63
PRPF40B-206ENST00000547764 A0A1W2PPC4 97 aa19■□□□□ 0.63
PRPF40B-206ENST00000547764 RCCD1A6NED2 376 aa19■□□□□ 0.63
PRPF40B-206ENST00000547764 CDX4O14627 284 aaPredicted RBP19■□□□□ 0.63
PRPF40B-206ENST00000547764 SLC30A4O14863 429 aa19■□□□□ 0.63
PRPF40B-206ENST00000547764 INSIG1O15503 277 aa19■□□□□ 0.63
PRPF40B-206ENST00000547764 BUB1BO60566 1050 aaPredicted RBP19■□□□□ 0.63
PRPF40B-206ENST00000547764 IPO7O95373 1038 aaKnown RBP19■□□□□ 0.63
PRPF40B-206ENST00000547764 UGT2B4P06133 528 aa19■□□□□ 0.63
PRPF40B-206ENST00000547764 COMTP21964 271 aa19■□□□□ 0.63
PRPF40B-206ENST00000547764 LRRC38Q5VT99 294 aa19■□□□□ 0.63
PRPF40B-206ENST00000547764 NCBP2-AS2Q69YL0 99 aa19■□□□□ 0.63
PRPF40B-206ENST00000547764 FAF2Q96CS3 445 aa19■□□□□ 0.63
PRPF40B-206ENST00000547764 CACNA1EQ15878 2313 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 LRRD1A4D1F6 860 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 C4orf47A7E2U8 309 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 ARHGAP33O14559 1287 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 SPOPO43791 374 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 MAFKO60675 156 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 MAPK8P45983 427 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 NEK3P51956 506 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 RAD51Q06609 339 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 PUM1Q14671 1186 aaKnown RBP eCLIP18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 RFTN1Q14699 578 aaPredicted RBP18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 PAFAH1B3Q15102 231 aaKnown RBP18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 ZNF805Q5CZA5 627 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 FBXL19Q6PCT2 694 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 GDPD4Q6W3E5 623 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 PARS2Q7L3T8 475 aaKnown RBP18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 RHOT1Q8IXI2 618 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 PQLC3Q8N755 202 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 TSEN2Q8NCE0 465 aaKnown RBP18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 ACRBPQ8NEB7 543 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 KLHL32Q96NJ5 620 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 OSBPL1AQ9BXW6 950 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 GOLPH3Q9H4A6 298 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 PREBQ9HCU5 417 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 TM9SF3Q9HD45 589 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 TMEM9BQ9NQ34 198 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 SALL4Q9UJQ4 1053 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 TPX2Q9ULW0 747 aaKnown RBP18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 ALG6Q9Y672 507 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 DCHS1Q96JQ0 3298 aa18.99■□□□□ 0.63
PRPF40B-206ENST00000547764 ADAMTS9Q9P2N4 1935 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 C3orf70A6NLC5 250 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 C16orf96A6NNT2 1141 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 LATO43561 262 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 MFSD11O43934 449 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 PEX11BO96011 259 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 SYPP08247 313 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 TNNT1P13805 278 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 ADRB3P13945 408 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 MAT2AP31153 395 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 RGRP47804 291 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 CSNK1EP49674 416 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 AFF3P51826 1226 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms