RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 GRIN3AQ8TCU5 1115 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 HAUS1Q96CS2 278 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 SPACA7Q96KW9 195 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 BRD8Q9H0E9 1235 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 CARD9Q9H257 536 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 ZDHHC6Q9H6R6 413 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 MBD1Q9UIS9 605 aaPredicted RBP20.78■□□□□ 0.92
HMGA2-211ENST00000545998 JRKLQ9Y4A0 524 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 THADAQ6YHU6 1953 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 C1QTNF3-AMACRE9PGA6 284 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 KIF5CO60282 957 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 POP4O95707 220 aaKnown RBP20.77■□□□□ 0.92
HMGA2-211ENST00000545998 GKP32189 559 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 NBL1P41271 181 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 CSNK1DP48730 415 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 RENBPP51606 427 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 ZNF235Q14590 738 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 ZNF569Q5MCW4 686 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 USP30Q70CQ3 517 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 RYBPQ8N488 228 aaPredicted RBP20.77■□□□□ 0.92
HMGA2-211ENST00000545998 AADATQ8N5Z0 425 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 KCND1Q9NSA2 647 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 SERGEFQ9UGK8 458 aa20.77■□□□□ 0.92
HMGA2-211ENST00000545998 EVLQ9UI08 416 aaPredicted RBP20.77■□□□□ 0.92
HMGA2-211ENST00000545998 A0A1W2PP55 124 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 KRIT1O00522 736 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 KCNK3O14649 394 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 INSIG1O15503 277 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 CCNB1P14635 433 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 DRD3P35462 400 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 MMP13P45452 471 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 AP1B1Q10567 949 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 KLF1Q13351 362 aaPredicted RBP20.76■□□□□ 0.91
HMGA2-211ENST00000545998 PRKD1Q15139 912 aaPredicted RBP20.76■□□□□ 0.91
HMGA2-211ENST00000545998 SLC35F6Q8N357 371 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 BBS5Q8N3I7 341 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 PGBD5Q8N414 524 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 LRIG1Q96JA1 1093 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 MGME1Q9BQP7 344 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 EPC1Q9H2F5 836 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 FBXL12Q9NXK8 326 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 LAMA1P25391 3075 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 GPR179Q6PRD1 2367 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 GON4LQ3T8J9 2241 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 BCKDHBP21953 392 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 OXTRP30559 389 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 HSPA9P38646 679 aaKnown RBP20.76■□□□□ 0.91
HMGA2-211ENST00000545998 NOMO1Q15155 1222 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 POM121L1PQ3SYA9 428 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 SEL1L2Q5TEA6 688 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 CCDC181Q5TID7 509 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 FAM131CQ96AQ9 280 aa20.76■□□□□ 0.91
HMGA2-211ENST00000545998 CPEB1Q9BZB8 566 aaKnown RBP20.76■□□□□ 0.91
HMGA2-211ENST00000545998 WSB2Q9NYS7 404 aaPredicted RBP20.76■□□□□ 0.91
HMGA2-211ENST00000545998 KCNK1O00180 336 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 KPNA3O00505 521 aaPredicted RBP20.75■□□□□ 0.91
HMGA2-211ENST00000545998 ENC1O14682 589 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 CR2P20023 1033 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 CD6P30203 668 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 IFI35P80217 286 aaPredicted RBP20.75■□□□□ 0.91
HMGA2-211ENST00000545998 OTUD4Q01804 1114 aaKnown RBP20.75■□□□□ 0.91
HMGA2-211ENST00000545998 NHLH1Q02575 133 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 RAD51Q06609 339 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 SFSWAPQ12872 951 aaKnown RBP20.75■□□□□ 0.91
HMGA2-211ENST00000545998 B4GALNT4Q76KP1 1039 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 SRLQ86TD4 932 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 KBTBD6Q86V97 674 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 C11orf74Q86VG3 221 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 ZC3H18Q86VM9 953 aaKnown RBP20.75■□□□□ 0.91
HMGA2-211ENST00000545998 HDDC3Q8N4P3 179 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 ACTL9Q8TC94 416 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 TFB1MQ8WVM0 346 aaKnown RBP20.75■□□□□ 0.91
HMGA2-211ENST00000545998 ARRDC3Q96B67 414 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 TOE1Q96GM8 510 aaKnown RBP20.75■□□□□ 0.91
HMGA2-211ENST00000545998 IL12RB2Q99665 862 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 OMDQ99983 421 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 NT5MQ9NPB1 228 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 RBM22Q9NW64 420 aaKnown RBP eCLIP20.75■□□□□ 0.91
HMGA2-211ENST00000545998 AMACRQ9UHK6 382 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 FZD4Q9ULV1 537 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 NCKAP1Q9Y2A7 1128 aa20.75■□□□□ 0.91
HMGA2-211ENST00000545998 HACD1B0YJ81 288 aa20.74■□□□□ 0.91
HMGA2-211ENST00000545998 GJB3O75712 270 aa20.74■□□□□ 0.91
HMGA2-211ENST00000545998 RNASEH2AO75792 299 aaKnown RBP20.74■□□□□ 0.91
HMGA2-211ENST00000545998 MSNP26038 577 aaKnown RBP20.74■□□□□ 0.91
HMGA2-211ENST00000545998 XRCC4Q13426 336 aa20.74■□□□□ 0.91
HMGA2-211ENST00000545998 SIM2Q14190 667 aaPredicted RBP20.74■□□□□ 0.91
HMGA2-211ENST00000545998 SLC36A4Q6YBV0 504 aa20.74■□□□□ 0.91
HMGA2-211ENST00000545998 CEP68Q76N32 757 aa20.74■□□□□ 0.91
HMGA2-211ENST00000545998 FAM124AQ86V42 546 aa20.74■□□□□ 0.91
HMGA2-211ENST00000545998 GANCQ8TET4 914 aa20.74■□□□□ 0.91
HMGA2-211ENST00000545998 ZC3H10Q96K80 434 aaKnown RBP20.74■□□□□ 0.91
HMGA2-211ENST00000545998 QKIQ96PU8 341 aaKnown RBP eCLIP20.74■□□□□ 0.917e-6■■□□□ 13
HMGA2-211ENST00000545998 OSBPL1AQ9BXW6 950 aa20.74■□□□□ 0.91
HMGA2-211ENST00000545998 DUSP15Q9H1R2 295 aaPredicted RBP20.74■□□□□ 0.91
HMGA2-211ENST00000545998 NEUROG2Q9H2A3 272 aa20.74■□□□□ 0.91
HMGA2-211ENST00000545998 TCRBV7S2A1N4TA0A589 114 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 JCHAINP01591 159 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 UGT2B4P06133 528 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 ITGB7P26010 798 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms