RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 COLGALT2Q8IYK4 626 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 ANKRD13AQ8IZ07 590 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 TDRD5Q8NAT2 981 aaKnown RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SHCBP1Q8NEM2 672 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 OR13H1Q8NG92 308 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 UBA3Q8TBC4 463 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 HM13Q8TCT9 377 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PYDC1Q8WXC3 89 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 KCTD13Q8WZ19 329 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 EZH1Q92800 747 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 LENG1Q96BZ8 264 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PGAP3Q96FM1 320 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 DCUN1D1Q96GG9 259 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SCARF2Q96GP6 870 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 WNK4Q96J92 1243 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CLMNQ96JQ2 1002 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 BIRC8Q96P09 236 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CATSPER2Q96P56 530 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 GPR22Q99680 433 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 MCMBPQ9BTE3 642 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 TRMOQ9BU70 441 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 OSBPL11Q9BXB4 747 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 ZCCHC2Q9C0B9 1178 aaKnown RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 C20orf27Q9GZN8 174 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SPATC1LQ9H0A9 340 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 MUC13Q9H3R2 512 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 RHOJQ9H4E5 214 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 DHX35Q9H5Z1 703 aaKnown RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF385DQ9H6B1 395 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 COG4Q9H9E3 785 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 NMRAL1Q9HBL8 299 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 BRD7Q9NPI1 651 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PIM2Q9P1W9 311 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 FNIP2Q9P278 1114 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 TJP2Q9UDY2 1190 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 MARCOQ9UEW3 520 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 HACL1Q9UJ83 578 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 TLK1Q9UKI8 766 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 ADAMTS6Q9UKP5 1117 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SARDHQ9UL12 918 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CDYLQ9Y232 598 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 NR2E3Q9Y5X4 410 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 RPS6KL1Q9Y6S9 549 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 RLFQ13129 1914 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 WDR81Q562E7 1941 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 DNAJC25-GNG10A0A024R161 153 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 A0A087X1B8 175 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 A0A096LPK6 155 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 RRN3P2A6NIE6 340 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 BBIP1A8MTZ0 92 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 G3V2L1 256 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 CXCL11O14625 94 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 EFSO43281 561 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 DCXO43602 365 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 ITM2AO43736 263 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 UGT1A9O60656 530 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 DNAJA2O60884 412 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 CLASP2O75122 1294 aaKnown RBP6.56□□□□□ -1.36
SNHG1-225ENST00000545920 F9P00740 461 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 ASLP04424 464 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 PRKCGP05129 697 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 C8BP07358 591 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 ZCCHC18P0CG32 403 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 FAM157BP0CG42 384 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 HSPA8P11142 646 aaKnown RBP6.56□□□□□ -1.36
SNHG1-225ENST00000545920 HOXD8P13378 290 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-225ENST00000545920 PAX3P23760 479 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 MGAT1P26572 445 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 PEX2P28328 305 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 HSPA1LP34931 641 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 SLC26A3P40879 764 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 IREB2P48200 963 aaKnown RBP6.56□□□□□ -1.36
SNHG1-225ENST00000545920 EPHB1P54762 984 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 AQP4P55087 323 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 INHBEP58166 350 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 TXNL4AP83876 142 aaKnown RBP6.56□□□□□ -1.36
SNHG1-225ENST00000545920 GBE1Q04446 702 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 PPIDQ08752 370 aaKnown RBP6.56□□□□□ -1.36
SNHG1-225ENST00000545920 ART3Q13508 389 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 PWP1Q13610 501 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 SLC12A1Q13621 1099 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 APOFQ13790 326 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 PRKG1Q13976 671 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 ZBTB6Q15916 424 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 CDO1Q16878 200 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF423Q2M1K9 1284 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 ARL13BQ3SXY8 428 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 SFT2D3Q587I9 215 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 PPP6R3Q5H9R7 873 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-225ENST00000545920 NBPF12Q5TAG4 269 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-225ENST00000545920 MAP1SQ66K74 1059 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-225ENST00000545920 PRMT9Q6P2P2 845 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 FRMD7Q6ZUT3 714 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 DENND5BQ6ZUT9 1274 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 ARMCX2Q7L311 632 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 MAVSQ7Z434 540 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 DSELQ8IZU8 1212 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 DCLK2Q8N568 766 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 PHC3Q8NDX5 983 aa6.56□□□□□ -1.36
SNHG1-225ENST00000545920 CEP70Q8NHQ1 597 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms