RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TRIML2Q8N7C3 387 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 RNF148Q8N7C7 305 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 ADAM32Q8TC27 787 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 FAM45AQ8TCE6 357 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 ATP6V1E2Q96A05 226 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PBXIP1Q96AQ6 731 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 CCDC126Q96EE4 140 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 GPR78Q96P69 363 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PGLYRP2Q96PD5 576 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PPP1R16BQ96T49 567 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 HNRNPABQ99729 332 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 LPIN3Q9BQK8 851 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 DUSP16Q9BY84 665 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 SPAG4Q9NPE6 437 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 CHRAC1Q9NRG0 131 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 DNAAF2Q9NVR5 837 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 CACNA2D2Q9NY47 1150 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 ADA2Q9NZK5 511 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 G3BP2Q9UN86 482 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 C7orf72A4D263 438 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 TRIM64CA6NLI5 447 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 H3BSA7 217 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PHGDHO43175 533 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 CACNG3O60359 315 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 TRPA1O75762 1119 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PGK2P07205 417 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 STMN1P16949 149 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PTPN1P18031 435 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 NFKB1P19838 968 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 MSX2P35548 267 aaPredicted RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 CCR10P46092 362 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 ADARP55265 1226 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 GJA9P57773 515 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PDAP1Q13442 181 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 KCTD2Q14681 263 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 DGKDQ16760 1214 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 KCTD21Q4G0X4 260 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 SAMD4BQ5PRF9 694 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 ALKAL1Q6UXT8 129 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 NETO2Q8NC67 525 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PTCD2Q8WV60 388 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 RMND5BQ96G75 393 aaPredicted RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 TEKT5Q96M29 485 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 APBA2Q99767 749 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 COQ10BQ9H8M1 238 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 MEAF6Q9HAF1 191 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 EML4Q9HC35 981 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 VPS45Q9NRW7 570 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PIGVQ9NUD9 493 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 SNTG2Q9NY99 539 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PTBP2Q9UKA9 531 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 SLC8A2Q9UPR5 921 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 MYOCOSA0A1B0GUC4 107 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 ASB14A6NK59 587 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 KCNU1A8MYU2 1149 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 NFKBIEO00221 500 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 XPOTO43592 962 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 PDGFRBP09619 1106 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 NPR3P17342 541 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 ATP5F1P24539 256 aaPredicted RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 TKTP29401 623 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 GLRBP48167 497 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 ATP4BP51164 291 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 PITX1P78337 314 aaPredicted RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 GALNT1Q10472 559 aaPredicted RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 ZBTB17Q13105 803 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 VGLL4Q14135 290 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 PCBP1Q15365 356 aaKnown RBP eCLIP8.85□□□□□ -0.99
TDP1-204ENST00000545686 SV2CQ496J9 727 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 PCID2Q5JVF3 399 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 TSTD2Q5T7W7 516 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 REP15Q6BDI9 236 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 KRT80Q6KB66 452 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 C8orf82Q6P1X6 216 aaPredicted RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 GK5Q6ZS86 529 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 LPCAT2Q7L5N7 544 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 SLC41A1Q8IVJ1 513 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 TP53INP2Q8IXH6 220 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 ANKFN1Q8N957 763 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 APPL2Q8NEU8 664 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 DPF3Q92784 378 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 C18orf25Q96B23 403 aaPredicted RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 PGAP3Q96FM1 320 aaPredicted RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 MARK4Q96L34 752 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 PPP1R2P1Q96PQ5 205 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 SLC25A23Q9BV35 468 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 TMPRSS4Q9NRS4 437 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 TBCCD1Q9NVR7 557 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 RRN3Q9NYV6 651 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 CD300AQ9UGN4 299 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 ZNHIT2Q9UHR6 403 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 PATJQ8NI35 1801 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 FAM95CA0A1B0GW59 222 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 E7ENX8 843 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 HCRTO43612 131 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 STAMBPO95630 424 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 PGK1P00558 417 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 AHSGP02765 367 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 HSPA8P11142 646 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 BMP2P12643 396 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms