RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 PRDM8Q9NQV8 689 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 MAN1C1Q9NR34 630 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 RXFP3Q9NSD7 469 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 TRMT13Q9NUP7 481 aaKnown RBP5.21□□□□□ -1.58
UBE4A-203ENST00000545354 FBXO28Q9NVF7 368 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 DNAJC11Q9NVH1 559 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 PCDHGB4Q9UN71 923 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 DOLKQ9UPQ8 538 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 ZFR2Q9UPR6 939 aaKnown RBP5.21□□□□□ -1.58
UBE4A-203ENST00000545354 SLC22A14Q9Y267 594 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 TNFSF13BQ9Y275 285 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 ACOT9Q9Y305 439 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 GPSM3Q9Y4H4 160 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 TNPO3Q9Y5L0 923 aaKnown RBP5.21□□□□□ -1.58
UBE4A-203ENST00000545354 FKBP7Q9Y680 259 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 CLUHO75153 1309 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 USP31Q70CQ4 1352 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 PTPRKQ15262 1439 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 CPS1P31327 1500 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 KDM5CP41229 1560 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 ABCA6Q8N139 1617 aa5.21□□□□□ -1.58
UBE4A-203ENST00000545354 MTMR11A4FU01 709 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 LRRC53A6NM62 1247 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L5A8MUK1 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L15C9J2P7 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L12C9JPN9 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L11C9JVI0 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L21D6R901 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L18D6R9N7 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L22D6RA61 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L19D6RCP7 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 CFAP99D6REC4 459 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L20D6RJB6 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 PDE2AO00408 941 aaPredicted RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 POLRMTO00411 1230 aaKnown RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 PODXLO00592 558 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 VILLO15195 856 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 PMM2O15305 246 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 TLL1O43897 1013 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 NOL4O94818 638 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 UPP2O95045 317 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 SCAF4O95104 1147 aaKnown RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 ZWINTO95229 277 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 FUCA1P04066 466 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 S100A8P05109 93 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 SERPINA5P05154 406 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 FHP07954 510 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 STSP08842 583 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 HBQ1P09105 142 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 RBP1P09455 135 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 SBK2P0C263 348 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 BMP2P12643 396 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 COX4I1P13073 169 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 CPEP16870 476 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 IFNAR1P17181 557 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 TNNI1P19237 187 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 DRD4P21917 467 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 HOXA7P31268 230 aaPredicted RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 CCR1P32246 355 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 GPR3P46089 330 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 GRIA4P48058 902 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 MEOX2P50222 304 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 CHN2P52757 468 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 RIDAP52758 137 aaKnown RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 YARSP54577 528 aaKnown RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 PRRX1P54821 245 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 ALDH6A1Q02252 535 aaKnown RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 FOLH1Q04609 750 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 YWHAHQ04917 246 aaPredicted RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 USP17L24Q0WX57 530 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 ABRQ12979 859 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 AUHQ13825 339 aaKnown RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 PKP1Q13835 747 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 DGCR6Q14129 220 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 KRT81Q14533 505 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 STARD3Q14849 445 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 KIF14Q15058 1648 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 ANGPT1Q15389 498 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 MARCH8Q5T0T0 291 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 SCARA3Q6AZY7 606 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 RBM44Q6ZP01 1051 aaKnown RBP5.2□□□□□ -1.58
UBE4A-203ENST00000545354 HTR3DQ70Z44 454 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 PLEKHH3Q7Z736 793 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 RNF180Q86T96 592 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 LUZP2Q86TE4 346 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 KBTBD6Q86V97 674 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 C12orf40Q86WS4 652 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 PNPLA6Q8IY17 1366 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 PDPRQ8NCN5 879 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 GPR156Q8NFN8 814 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 OR8K5Q8NH50 307 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 PIK3R3Q92569 461 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 UFD1Q92890 307 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 ZNF566Q969W8 418 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 RILPL2Q969X0 211 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 MCRS1Q96EZ8 462 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 MYRFLQ96LU7 910 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 ZNF416Q9BWM5 594 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 TRIM54Q9BYV2 358 aa5.2□□□□□ -1.58
UBE4A-203ENST00000545354 KLC2Q9H0B6 622 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms