RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 AKR1B10O60218 316 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 TMCC1O94876 653 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 IGSF6O95976 241 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 H2AFZP0C0S5 128 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 KCNA4P22459 653 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 EIF4A3P38919 411 aaKnown RBP12.01□□□□□ -0.49
HDAC4-216ENST00000544989 HLA-BQ31612 363 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 PPP6R3Q5H9R7 873 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-216ENST00000544989 PIP5KL1Q5T9C9 394 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 KIAA1161Q6NSJ0 714 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 FBXL19Q6PCT2 694 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 SARM1Q6SZW1 724 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 H2AFVQ71UI9 128 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 RYBPQ8N488 228 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-216ENST00000544989 ARFGAP1Q8N6T3 406 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 RNF214Q8ND24 703 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 HMCESQ96FZ2 354 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 ORAI3Q9BRQ5 295 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 NOL6Q9H6R4 1146 aaKnown RBP12.01□□□□□ -0.49
HDAC4-216ENST00000544989 ZDHHC6Q9H6R6 413 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 LRRC19Q9H756 370 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 RCOR3Q9P2K3 495 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-216ENST00000544989 UBA2Q9UBT2 640 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-216ENST00000544989 MFHAS1Q9Y4C4 1052 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 PCDHB9Q9Y5E1 797 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 WASF2Q9Y6W5 498 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 ITPR1Q14643 2758 aa12.01□□□□□ -0.49
HDAC4-216ENST00000544989 KNL1Q8NG31 2342 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 PRAMEF26H0Y7S4 382 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 FLRT2O43155 660 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 MFAP3LO75121 409 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 TRIM16O95361 564 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 CD160O95971 181 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 ADRB3P13945 408 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 AKT2P31751 481 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 SERPINB6P35237 376 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 CTSKP43235 329 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 CCT8P50990 548 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 SUOXP51687 545 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 RHOAP61586 193 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 RPS21P63220 83 aaKnown RBP12□□□□□ -0.49
HDAC4-216ENST00000544989 RFTN1Q14699 578 aaPredicted RBP12□□□□□ -0.49
HDAC4-216ENST00000544989 STAT4Q14765 748 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 KIF19Q2TAC6 998 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 MYLK3Q32MK0 819 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 POM121L1PQ3SYA9 428 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 ZNF805Q5CZA5 627 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 HORMAD1Q86X24 394 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 DNAAF5Q86Y56 855 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 LRRC49Q8IUZ0 686 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 MFSD2AQ8NA29 543 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 CHST14Q8NCH0 376 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 ZNF564Q8TBZ8 553 aaPredicted RBP12□□□□□ -0.49
HDAC4-216ENST00000544989 HCAR2Q8TDS4 363 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 FEM1CQ96JP0 617 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 CCDC42Q96M95 316 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 PEBP4Q96S96 227 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 KCTD15Q96SI1 283 aaPredicted RBP12□□□□□ -0.49
HDAC4-216ENST00000544989 MAGEB5Q9BZ81 275 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 CPEB1Q9BZB8 566 aaKnown RBP12□□□□□ -0.49
HDAC4-216ENST00000544989 TM6SF2Q9BZW4 377 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 TRIM7Q9C029 511 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 ERVMER34-1Q9H9K5 563 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 FSCN3Q9NQT6 498 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 GDF3Q9NR23 364 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 TM7SF3Q9NS93 570 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 ABHD10Q9NUJ1 306 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 GPATCH2LQ9NWQ4 482 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 CTTNBP2NLQ9P2B4 639 aa12□□□□□ -0.49
HDAC4-216ENST00000544989 GCN1Q92616 2671 aaKnown RBP12□□□□□ -0.49
HDAC4-216ENST00000544989 PCNX2A6NKB5 2137 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 AKR1B15C9JRZ8 316 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-216ENST00000544989 KRIT1O00522 736 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 TSPAN6O43657 245 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 PCDHGA12O60330 932 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 PRAMEF11O60813 436 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 PCDH8O95206 1070 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 TMEM253P0C7T8 217 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 CD59P13987 128 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 ERCC2P18074 760 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 ARRB1P49407 418 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-216ENST00000544989 RENBPP51606 427 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 METAP1P53582 386 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 PPP2CBP62714 309 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 PPP2CAP67775 309 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 DPYSQ14117 519 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 CA9Q16790 459 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 ZNF423Q2M1K9 1284 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 N4BP2L1Q5TBK1 243 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-216ENST00000544989 AFMIDQ63HM1 303 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 TMCO3Q6UWJ1 677 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 CYP4V2Q6ZWL3 525 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-216ENST00000544989 NAXDQ8IW45 347 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 MAP7D3Q8IWC1 876 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 DEFB124Q8NES8 71 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 ARRDC3Q96B67 414 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 SLC6A18Q96N87 628 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 ZNF599Q96NL3 588 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 CDC6Q99741 560 aa11.99□□□□□ -0.49
HDAC4-216ENST00000544989 TRIM5Q9C035 493 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms