RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 BTBD6Q96KE9 485 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 PKNOX2Q96KN3 472 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 DDX50Q9BQ39 737 aaKnown RBP6.74□□□□□ -1.33
CDCA3-209ENST00000544610 DCLK3Q9C098 648 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 MKRN2Q9H000 416 aaKnown RBP6.74□□□□□ -1.33
CDCA3-209ENST00000544610 NMUR1Q9HB89 426 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 PIGVQ9NUD9 493 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 DDIT4Q9NX09 232 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 WSB2Q9NYS7 404 aaPredicted RBP6.74□□□□□ -1.33
CDCA3-209ENST00000544610 USP36Q9P275 1121 aaKnown RBP6.74□□□□□ -1.33
CDCA3-209ENST00000544610 PPARGC1AQ9UBK2 798 aaKnown RBP6.74□□□□□ -1.33
CDCA3-209ENST00000544610 PCYOX1Q9UHG3 505 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 FZD10Q9ULW2 581 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 DRG1Q9Y295 367 aaKnown RBP6.74□□□□□ -1.33
CDCA3-209ENST00000544610 SLC27A6Q9Y2P4 619 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 STON1Q9Y6Q2 735 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 IGF2RP11717 2491 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 DSPP15924 2871 aaKnown RBP6.74□□□□□ -1.33
CDCA3-209ENST00000544610 FAM208BQ5VWN6 2430 aa6.74□□□□□ -1.33
CDCA3-209ENST00000544610 IGLV3-10A0A075B6K4 115 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 hCG_1818297A0A087WSY0 165 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 A0A1B0GTW7 788 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 A0A1W2PQH9 124 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 LRRD1A4D1F6 860 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 CFAP69A5D8W1 941 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 MEI4A8MW99 385 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 WASH4PA8MWX3 477 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 H3BRJ5 948 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 APOC4-APOC2K7ER74 178 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 KRIT1O00522 736 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 MTSS1O43312 755 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 CEP104O60308 925 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 GRAP2O75791 330 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 STC2O76061 302 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 DXOO77932 396 aaKnown RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 DKK1O94907 266 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 IGLV3-19P01714 112 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 APOEP02649 317 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 APOC2P02655 101 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 FGGP02679 453 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 KLKB1P03952 638 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 ZNF883P0CG24 379 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 MAOBP27338 520 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 IL1R2P27930 398 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 STIP1P31948 543 aaKnown RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 IL12RB1P42701 662 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 SLC11A2P49281 568 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 TPMTP51580 245 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 TAS2R40P59535 323 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 ATP11AP98196 1134 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 STARD3Q14849 445 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 GEN1Q17RS7 908 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 C15orf59Q2T9L4 293 aaPredicted RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 MSS51Q4VC12 460 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 C10orf120Q5SQS8 335 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 MPP7Q5T2T1 576 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 MANEALQ5VSG8 457 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 TTC39BQ5VTQ0 682 aaPredicted RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 SLC9A4Q6AI14 798 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 CCNI2Q6ZMN8 369 aaPredicted RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 SPOCD1Q6ZMY3 1216 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 TAC4Q86UU9 113 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 ZCCHC9Q8N567 271 aaKnown RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 ATP6V0D2Q8N8Y2 350 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 ZNF557Q8N988 423 aaPredicted RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 KCTD6Q8NC69 237 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 ANKK1Q8NFD2 765 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 BAHD1Q8TBE0 780 aaPredicted RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 GRK7Q8WTQ7 553 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 SREK1Q8WXA9 508 aaKnown RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 BHMTQ93088 406 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 HAUS1Q96CS2 278 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 RNF157Q96PX1 679 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 SNRNP25Q9BV90 132 aaKnown RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 GOLPH3Q9H4A6 298 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 FAM204AQ9H8W3 233 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 PCDH18Q9HCL0 1135 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 ITM2CQ9NQX7 267 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 PLK2Q9NYY3 685 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 MARCH2Q9P0N8 246 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 THAP10Q9P2Z0 257 aaPredicted RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 NUDT5Q9UKK9 219 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 PCOLCE2Q9UKZ9 415 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 AP4E1Q9UPM8 1137 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 NAALADL1Q9UQQ1 740 aa6.73□□□□□ -1.33
CDCA3-209ENST00000544610 APOBEC2Q9Y235 224 aaKnown RBP6.73□□□□□ -1.33
CDCA3-209ENST00000544610 PKD1L2Q7Z442 2459 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 ADAMTS9Q9P2N4 1935 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 FAM187AA6NFU0 413 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 TMEM110-MUSTN1A8MSY1 372 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 METTL12A8MUP2 240 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 HACD1B0YJ81 288 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 SYNCRIPO60506 623 aaKnown RBP6.72□□□□□ -1.33
CDCA3-209ENST00000544610 PHF2O75151 1096 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 CER1O95813 267 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 KRT1P04264 644 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 ITGAVP06756 1048 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 MX2P20592 715 aa6.72□□□□□ -1.33
CDCA3-209ENST00000544610 IL4RP24394 825 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms