RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ASIC4Q96FT7 647 aa30.86■■■□□ 2.53
CCM2-219ENST00000544363 CFAP36Q96G28 342 aa30.86■■■□□ 2.53
CCM2-219ENST00000544363 MSLNLQ96KJ4 702 aa30.86■■■□□ 2.53
CCM2-219ENST00000544363 SLC2A11Q9BYW1 496 aa30.86■■■□□ 2.53
CCM2-219ENST00000544363 MYZAPP0CAP1 466 aa30.85■■■□□ 2.53
CCM2-219ENST00000544363 RANBP10Q6VN20 620 aa30.85■■■□□ 2.53
CCM2-219ENST00000544363 CROCCP2Q86T23 111 aa30.85■■■□□ 2.53
CCM2-219ENST00000544363 TMBIM4Q9HC24 238 aa30.85■■■□□ 2.53
CCM2-219ENST00000544363 THG1LQ9NWX6 298 aaKnown RBP30.85■■■□□ 2.53
CCM2-219ENST00000544363 SYBUQ9NX95 663 aa30.85■■■□□ 2.53
CCM2-219ENST00000544363 GGA2Q9UJY4 613 aa30.85■■■□□ 2.53
CCM2-219ENST00000544363 CXorf51AA0A1B0GTR3 108 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 TCEA3O75764 348 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 ADH1CP00326 375 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 GSTA2P09210 222 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 CR2P20023 1033 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 IGFBP4P22692 258 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 CES1P23141 567 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 RGRP47804 291 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 CRADDP78560 199 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 SLC14A2Q15849 920 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 PCSK7Q16549 785 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 DENND5AQ6IQ26 1287 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 CASC4Q6P4E1 433 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 CCNJLQ8IV13 435 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 KRT222Q8N1A0 295 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 PKNOX2Q96KN3 472 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 GJB3O75712 270 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 SERPINF2P08697 491 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 ADH5P11766 374 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 PABPC1P11940 636 aaKnown RBP30.84■■■□□ 2.53
CCM2-219ENST00000544363 MLLT1Q03111 559 aaPredicted RBP30.84■■■□□ 2.53
CCM2-219ENST00000544363 SLC20A2Q08357 652 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 ARL8AQ96BM9 186 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 NAT9Q9BTE0 207 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 RABGEF1Q9UJ41 708 aa30.84■■■□□ 2.53
CCM2-219ENST00000544363 DOCK8Q8NF50 2099 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 GOLGA8KD6RF30 607 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 RASGRF2O14827 1237 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 HOXC11O43248 304 aaPredicted RBP30.83■■■□□ 2.53
CCM2-219ENST00000544363 NFATC1O95644 943 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 MT-CO1P00395 513 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 GBP2P32456 591 aaPredicted RBP30.83■■■□□ 2.53
CCM2-219ENST00000544363 DMC1Q14565 340 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 FUT11Q495W5 492 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 UNC5AQ6ZN44 842 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 EPS8L3Q8TE67 593 aaKnown RBP30.83■■■□□ 2.53
CCM2-219ENST00000544363 FBF1Q8TES7 1133 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 FAM83CQ9BQN1 747 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 IL22Q9GZX6 179 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 PLAC1Q9HBJ0 212 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 LHX3Q9UBR4 397 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 FBXO10Q9UK96 956 aa30.83■■■□□ 2.53
CCM2-219ENST00000544363 REV3LO60673 3130 aa30.82■■■□□ 2.53
CCM2-219ENST00000544363 INSIG1O15503 277 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 IVLP07476 585 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 ARSAP15289 507 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 SERPINH1P50454 418 aaKnown RBP30.82■■■□□ 2.52
CCM2-219ENST00000544363 SCNN1BP51168 640 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 NSUN2Q08J23 767 aaKnown RBP eCLIP30.82■■■□□ 2.52
CCM2-219ENST00000544363 LONRF1Q17RB8 773 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 CERCAMQ5T4B2 595 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 VITQ6UXI7 678 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 KDELC2Q7Z4H8 507 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 KIAA0907Q7Z7F0 614 aaPredicted RBP30.82■■■□□ 2.52
CCM2-219ENST00000544363 METTL3Q86U44 580 aaKnown RBP30.82■■■□□ 2.52
CCM2-219ENST00000544363 DDX51Q8N8A6 666 aaKnown RBP eCLIP30.82■■■□□ 2.52
CCM2-219ENST00000544363 NAT16Q8N8M0 369 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 ST13P5Q8NFI4 369 aaPredicted RBP30.82■■■□□ 2.52
CCM2-219ENST00000544363 ATP2A3Q93084 1043 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 ZFYVE19Q96K21 471 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 EXOC2Q96KP1 924 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 NUDCD1Q96RS6 583 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 ARNT2Q9HBZ2 717 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 NOD2Q9HC29 1040 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 SCUBE2Q9NQ36 999 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 SAMD15Q9P1V8 674 aa30.82■■■□□ 2.52
CCM2-219ENST00000544363 FCF1Q9Y324 198 aaKnown RBP30.82■■■□□ 2.52
CCM2-219ENST00000544363 TLDC2A0PJX2 215 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 LAMP2P13473 410 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 TPH1P17752 444 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 PGAM1P18669 254 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 OAS2P29728 719 aaKnown RBP30.81■■■□□ 2.52
CCM2-219ENST00000544363 PDGFRLQ15198 375 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 STEAP4Q687X5 459 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 MFSD6LQ8IWD5 586 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 XPO6Q96QU8 1125 aaKnown RBP30.81■■■□□ 2.52
CCM2-219ENST00000544363 EBF3Q9H4W6 596 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 POMKQ9H5K3 350 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 ACSS3Q9H6R3 686 aa30.81■■■□□ 2.52
CCM2-219ENST00000544363 EXOC1LA0A1B0GW35 172 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 TCRBV9S1A1TA0A576 114 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 RHOAP61586 193 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 FCHO2Q0JRZ9 810 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 TTMPQ5BVD1 217 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 TRIM56Q9BRZ2 755 aaKnown RBP30.8■■■□□ 2.52
CCM2-219ENST00000544363 CENPHQ9H3R5 247 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 LOC285095A0A1B0GVY8 99 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 MAGEB16A2A368 324 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 SMIM23A6NLE4 172 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms